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BUILD BIN report for stageR on tokay2

This page was generated on 2019-04-09 12:34:56 -0400 (Tue, 09 Apr 2019).

Package 1559/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
stageR 1.5.1
Koen Van den Berge
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/stageR
Branch: master
Last Commit: 19595c0
Last Changed Date: 2019-03-31 10:30:07 -0400 (Sun, 31 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK 

Summary

Package: stageR
Version: 1.5.1
Command: rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.5.1.tar.gz
StartedAt: 2019-04-09 09:02:34 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 09:03:24 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 49.7 seconds
RetCode: 0
Status:  OK  
PackageFile: stageR_1.5.1.zip
PackageFileSize: 1.019 MiB

Command output

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### Running command:
###
###   rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.5.1.tar.gz
###
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install for i386

* installing *source* package 'stageR' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'stageR'
    finding HTML links ... done
    adjustedAlphaLevel                      html  
    esetProstate                            html  
    getAdjustedPValues                      html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpsvDo5T/R.INSTALLb1c37e74a0e/stageR/man/getAdjustedPValues.Rd:34: missing link 'stageWiseAdjustment,stageR,character,numeric-method'
    getAlpha                                html  
    getMethod                               html  
    getPConfirmation                        html  
    getPScreen                              html  
    getResults                              html  
    getSignificantGenes                     html  
    getSignificantTx                        html  
    getTx2gene                              html  
    hammer.eset                             html  
    isAdjusted                              html  
    isPScreenAdjusted                       html  
    stageR                                  html  
    stageRClass                             html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpsvDo5T/R.INSTALLb1c37e74a0e/stageR/man/stageRClass.Rd:19: missing link 'getAdjustedPValues,stageR,logical,logical-method'
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpsvDo5T/R.INSTALLb1c37e74a0e/stageR/man/stageRClass.Rd:19: missing link 'getResults,stageR-method'
    stageRTx                                html  
    stageWiseAdjustment                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'stageR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'stageR' as stageR_1.5.1.zip
* DONE (stageR)