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BUILD report for mixOmics on malbec2

This page was generated on 2019-04-09 11:52:14 -0400 (Tue, 09 Apr 2019).

Package 1006/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mixOmics 6.7.1
Kim-Anh Le Cao
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/mixOmics
Branch: master
Last Commit: 6eb1ba6
Last Changed Date: 2019-03-28 21:09:37 -0400 (Thu, 28 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: mixOmics
Version: 6.7.1
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data mixOmics
StartedAt: 2019-04-08 22:21:10 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 22:22:57 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 107.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data mixOmics
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* checking for file ‘mixOmics/DESCRIPTION’ ... OK
* preparing ‘mixOmics’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vignette.Rmd’ using rmarkdown
Loading required package: MASS
Loading required package: lattice
Loading required package: ggplot2
Registered S3 methods overwritten by 'ggplot2':
  method         from 
  [.quosures     rlang
  c.quosures     rlang
  print.quosures rlang

Loaded mixOmics 6.7.1

Thank you for using mixOmics! Learn how to apply our methods with our tutorials on www.mixOmics.org, vignette and bookdown on  https://github.com/mixOmicsTeam/mixOmics
Questions: email us at mixomics[at]math.univ-toulouse.fr  
Bugs, Issues? https://github.com/mixOmicsTeam/mixOmics/issues
Cite us:  citation('mixOmics')
Warning in shape.input.plotIndiv(object = object, n = n, blocks = blocks,  :
  'ind.names' is set to FALSE as 'pch' overrides it
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Quitting from lines 754-760 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
need finite 'xlim' values
--- failed re-building ‘vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘vignette.Rmd’

Error: Vignette re-building failed.
Execution halted