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INSTALL report for cTRAP on tokay2

This page was generated on 2019-04-09 12:42:43 -0400 (Tue, 09 Apr 2019).

Package 367/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cTRAP 1.1.3
Nuno Saraiva-Agostinho
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/cTRAP
Branch: master
Last Commit: 4607f01
Last Changed Date: 2018-12-03 11:04:48 -0400 (Mon, 03 Dec 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: cTRAP
Version: 1.1.3
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cTRAP_1.1.3.tar.gz && rm -rf cTRAP.buildbin-libdir && mkdir cTRAP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cTRAP.buildbin-libdir cTRAP_1.1.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cTRAP_1.1.3.zip && rm cTRAP_1.1.3.tar.gz cTRAP_1.1.3.zip
StartedAt: 2019-04-08 19:25:21 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:26:58 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 96.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cTRAP_1.1.3.tar.gz && rm -rf cTRAP.buildbin-libdir && mkdir cTRAP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cTRAP.buildbin-libdir cTRAP_1.1.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cTRAP_1.1.3.zip && rm cTRAP_1.1.3.tar.gz cTRAP_1.1.3.zip
###
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100 2532k  100 2532k    0     0  30.4M      0 --:--:-- --:--:-- --:--:-- 32.5M

install for i386

* installing *source* package 'cTRAP' ...
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cTRAP'
    finding HTML links ... done
    ENCODEmetadata                          html  
    ENCODEsamples                           html  
    GCT-class                               html  
    cTRAP                                   html  
    checkColnames                           html  
    closeOpenHandles                        html  
    compareAgainstL1000                     html  
    correlatePerCellLine                    html  
    counts                                  html  
    diffExprStat                            html  
    downloadENCODEknockdownMetadata         html  
    downloadENCODEsamples                   html  
    downloadIfNeeded                        html  
    downloadL1000data                       html  
    filterL1000metadata                     html  
    fix.datatypes                           html  
    getENCODEcontrols                       html  
    getL1000Conditions                      html  
    getL1000PerturbationTypes               html  
    l1000metadata                           html  
    l1000perturbationsKnockdown             html  
    l1000perturbationsSmallMolecules        html  
    loadENCODEsample                        html  
    loadL1000perturbations                  html  
    performDifferentialExpression           html  
    performGSAperCellLine                   html  
    plotGSEA                                html  
    plotL1000comparison                     html  
    prepareENCODEgeneExpression             html  
    processIds                              html  
    readGctxIds                             html  
    readGctxMeta                            html  
    subsetToIds                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cTRAP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cTRAP' as cTRAP_1.1.3.zip
* DONE (cTRAP)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'cTRAP' successfully unpacked and MD5 sums checked