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BUILD BIN report for TCGAutils on tokay2

This page was generated on 2019-04-09 12:38:57 -0400 (Tue, 09 Apr 2019).

Package 1598/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAutils 1.3.33
Marcel Ramos
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/TCGAutils
Branch: master
Last Commit: 5aaa395
Last Changed Date: 2019-04-01 19:12:14 -0400 (Mon, 01 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: TCGAutils
Version: 1.3.33
Command: rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.3.33.tar.gz
StartedAt: 2019-04-09 09:05:07 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 09:07:38 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 151.6 seconds
RetCode: 0
Status:  OK  
PackageFile: TCGAutils_1.3.33.zip
PackageFileSize: 414.6 KiB

Command output

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### Running command:
###
###   rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.3.33.tar.gz
###
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install for i386

* installing *source* package 'TCGAutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TCGAutils'
    finding HTML links ... done
    ID-translation                          html  
    TCGAbarcode                             html  
    TCGAbiospec                             html  
    TCGAsampleSelect                        html  
    finding level-2 HTML links ... done

    TCGAutils-package                       html  
    builds                                  html  
    clinicalNames                           html  
    curatedTCGAData-helpers                 html  
    diseaseCodes                            html  
    findGRangesCols                         html  
    generateMap                             html  
    getFileName                             html  
    hidden-helpers                          html  
    imputeAssay                             html  
    makeGRangesListFromCopyNumber           html  
    makeGRangesListFromExonFiles            html  
    makeSummarizedExperimentFromGISTIC      html  
    mergeColData                            html  
    sampleTypes                             html  
    simplifyTCGA                            html  
    trimColData                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TCGAutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCGAutils' as TCGAutils_1.3.33.zip
* DONE (TCGAutils)