| Back to Multiple platform build/check report for BioC 3.9 | 
 | 
This page was generated on 2019-04-09 12:31:05 -0400 (Tue, 09 Apr 2019).
| Package 1356/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RITAN 1.7.0 Michael Zimmermann 
 | malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS |  | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] |  | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |  | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | 
| Package: RITAN | 
| Version: 1.7.0 | 
| Command: rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.7.0.tar.gz | 
| StartedAt: 2019-04-09 08:50:44 -0400 (Tue, 09 Apr 2019) | 
| EndedAt: 2019-04-09 08:51:23 -0400 (Tue, 09 Apr 2019) | 
| EllapsedTime: 39.2 seconds | 
| RetCode: 0 | 
| Status: OK | 
| PackageFile: RITAN_1.7.0.zip | 
| PackageFileSize: 474.3 KiB | 
##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.7.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'RITAN' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
** help
*** installing help indices
  converting help for package 'RITAN'
    finding HTML links ... done
    as.graph                                html  
    check_any_net_input                     html  
    check_net_input                         html  
    enrichment_symbols                      html  
    geneset_overlap                         html  
    icon_test                               html  
    load_all_protein_coding_symbols         html  
    load_geneset_symbols                    html  
    network_overlap                         html  
    plot.term_enrichment                    html  
    plot.term_enrichment_by_subset          html  
    readGMT                                 html  
    readSIF                                 html  
    resource_reduce                         html  
    show_active_genesets_hist               html  
    summary.term_enrichment                 html  
    summary.term_enrichment_by_subset       html  
    term_enrichment                         html  
    term_enrichment_by_subset               html  
    vac1.day0vs31.de.genes                  html  
    vac1.day0vs56.de.genes                  html  
    vac2.day0vs31.de.genes                  html  
    vac2.day0vs56.de.genes                  html  
    writeGMT                                html  
    write_simple_table                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RITAN' ...
** testing if installed package can be loaded
Warning: replacing previous import 'gplots::plotCI' by 'plotrix::plotCI' when loading 'RITAN'
Warning: replacing previous import 'igraph::decompose' by 'stats::decompose' when loading 'RITAN'
Warning: replacing previous import 'gplots::lowess' by 'stats::lowess' when loading 'RITAN'
Warning: replacing previous import 'igraph::spectrum' by 'stats::spectrum' when loading 'RITAN'
* MD5 sums
packaged installation of 'RITAN' as RITAN_1.7.0.zip
* DONE (RITAN)