Steffen Durinck
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/GenomeGraphs |
| Branch: master |
| Last Commit: 72e1d62 |
| Last Changed Date: 2018-10-30 11:54:27 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 11:56:22 -0400 (Tue, 09 Apr 2019).
| Package 641/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GenomeGraphs 1.43.0 Steffen Durinck
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | ERROR | skipped | skipped |
| Package: GenomeGraphs |
| Version: 1.43.0 |
| Command: chmod a+r GenomeGraphs -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GenomeGraphs |
| StartedAt: 2019-04-08 21:11:49 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 21:15:26 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 217.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r GenomeGraphs -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GenomeGraphs
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* checking for file 'GenomeGraphs/DESCRIPTION' ... OK
* preparing 'GenomeGraphs':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'GenomeGraphs.Rnw' using Sweave
Loading required package: biomaRt
Loading required package: grid
Error: processing vignette 'GenomeGraphs.Rnw' failed with diagnostics:
chunk 11
Error in bmAttrFilt("attributes", mart, verbose = verbose) :
biomaRt error: looks like we're connecting to incompatible version of BioMart suite.
--- failed re-building 'GenomeGraphs.Rnw'
SUMMARY: processing the following file failed:
'GenomeGraphs.Rnw'
Error: Vignette re-building failed.
Execution halted