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BUILD BIN report for GeneRegionScan on tokay2

This page was generated on 2019-04-09 11:57:09 -0400 (Tue, 09 Apr 2019).

Package 628/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneRegionScan 1.39.0
Lasse Folkersen
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/GeneRegionScan
Branch: master
Last Commit: ac0adc4
Last Changed Date: 2018-10-30 11:54:28 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: GeneRegionScan
Version: 1.39.0
Command: rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.39.0.tar.gz
StartedAt: 2019-04-09 07:59:24 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 08:00:11 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 46.6 seconds
RetCode: 0
Status:  OK  
PackageFile: GeneRegionScan_1.39.0.zip
PackageFileSize: 7.584 MiB

Command output

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### Running command:
###
###   rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.39.0.tar.gz
###
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install for i386

* installing *source* package 'GeneRegionScan' ...
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeneRegionScan'
    finding HTML links ... done
    Nondocumented-objects                   html  
    ProbeLevelSet-class                     html  
    addSnpPdata                             html  
    checkForFileInPath                      html  
    doProbeLinear                           html  
    doProbeTTest                            html  
    exampleProbeLevelSet                    html  
    excludeDoubleMatchingProbes             html  
    exonStructure                           html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpOa2mRo/R.INSTALL12906f2e5d8a/GeneRegionScan/man/exonStructure.rd:21: file link 'DNAString' in package 'Biostrings' does not exist and so has been treated as a topic
    findProbePositions                      html  
    findSequenceInGenome                    html  
    geneRegionScan                          html  
    genomic                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpOa2mRo/R.INSTALL12906f2e5d8a/GeneRegionScan/man/genomic.Rd:13: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic
    getLocalMetaprobeIntensities            html  
    getLocalProbeIntensities                html  
    getMetaprobesetsFromRegionOfInterest    html  
    getProbeLevelAnnotationForExonArrays    html  
    getProbesetsFromMetaprobeset            html  
    getProbesetsFromRegionOfInterest        html  
    getSequence                             html  
    getServerProbeIntensities               html  
    mrna                                    html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpOa2mRo/R.INSTALL12906f2e5d8a/GeneRegionScan/man/mrna.Rd:12: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic
    plotCoexpression                        html  
    plotOnGene                              html  
    plotStatistics                          html  
    readGeneInput                           html  
    translateSampleNames                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GeneRegionScan' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneRegionScan' as GeneRegionScan_1.39.0.zip
* DONE (GeneRegionScan)