Van Anh Huynh-Thu
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/GENIE3 |
| Branch: master |
| Last Commit: 8b173a6 |
| Last Changed Date: 2019-01-31 18:53:17 -0400 (Thu, 31 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 11:48:30 -0400 (Tue, 09 Apr 2019).
| Package 637/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GENIE3 1.5.4 Van Anh Huynh-Thu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: GENIE3 |
| Version: 1.5.4 |
| Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL GENIE3 |
| StartedAt: 2019-04-08 17:58:45 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 17:58:48 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 2.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL GENIE3
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘GENIE3’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c GENIE3.c -o GENIE3.o
GENIE3.c: In function ‘find_the_best_threshold_multiregr’:
GENIE3.c:1368:24: warning: ‘best_threshold’ may be used uninitialized in this function [-Wmaybe-uninitialized]
current_threshold.f=best_threshold;
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GENIE3.c:1370:27: warning: ‘best_info’ may be used uninitialized in this function [-Wmaybe-uninitialized]
current_threshold_info=best_info;
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GENIE3.c: In function ‘build_one_tree_ensemble’:
GENIE3.c:1052:7: warning: ‘fp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
write_one_tree(current_tree, fp);
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GENIE3.c: In function ‘find_the_best_threshold_symb_multiregr’:
GENIE3.c:1466:27: warning: ‘best_info’ may be used uninitialized in this function [-Wmaybe-uninitialized]
current_threshold_info=best_info;
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GENIE3.c: In function ‘compute_ltrees_variable_importance_multiregr_separate’:
GENIE3.c:1762:10: warning: ‘flag_continue’ may be used uninitialized in this function [-Wmaybe-uninitialized]
return flag_continue;
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gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o GENIE3.so GENIE3.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-GENIE3/00new/GENIE3/libs
** R
** inst
** byte-compile and prepare package for lazy loading
in method for ‘GENIE3’ with signature ‘"SummarizedExperiment"’: no definition for class “SummarizedExperiment”
in method for ‘GENIE3’ with signature ‘"ExpressionSet"’: no definition for class “ExpressionSet”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GENIE3)