Back to Multiple platform build/check report for BioC 3.9
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

INSTALL report for FoldGO on tokay2

This page was generated on 2019-04-09 12:41:53 -0400 (Tue, 09 Apr 2019).

Package 580/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FoldGO 1.1.1
Daniil Wiebe
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/FoldGO
Branch: master
Last Commit: c21d78b
Last Changed Date: 2018-11-09 04:33:58 -0400 (Fri, 09 Nov 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: FoldGO
Version: 1.1.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/FoldGO_1.1.1.tar.gz && rm -rf FoldGO.buildbin-libdir && mkdir FoldGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FoldGO.buildbin-libdir FoldGO_1.1.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL FoldGO_1.1.1.zip && rm FoldGO_1.1.1.tar.gz FoldGO_1.1.1.zip
StartedAt: 2019-04-08 18:51:37 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:52:36 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 58.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/FoldGO_1.1.1.tar.gz && rm -rf FoldGO.buildbin-libdir && mkdir FoldGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FoldGO.buildbin-libdir FoldGO_1.1.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL FoldGO_1.1.1.zip && rm FoldGO_1.1.1.tar.gz FoldGO_1.1.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1748k  100 1748k    0     0  16.9M      0 --:--:-- --:--:-- --:--:-- 18.1M

install for i386

* installing *source* package 'FoldGO' ...
** R
** data
*** moving datasets to lazyload DB

** inst
** byte-compile and prepare package for lazy loading
in method for 'getAnnotation' with signature '"MgsaSets"': no definition for class "MgsaSets"
** help
*** installing help indices
  converting help for package 'FoldGO'
    finding HTML links ... done
    examdata_bg                             html  
    examdata_degs                           html  
    examdata_objs                           html  
    fagroupstopgo_class                     html  
    foldspectest_class                      html  
    gafreader_class                         html  
    genegroups_class                        html  
    getAnnotation                           html  
    getWholeIntName                         html  
    plot-FoldSpecTest-ANY-method            html  
    rna_seq_data                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'FoldGO' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'FoldGO' as FoldGO_1.1.1.zip
* DONE (FoldGO)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'FoldGO' successfully unpacked and MD5 sums checked