Andrey A Shabalin
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/ramwas |
| Branch: RELEASE_3_8 |
| Last Commit: 2e1d8f6 |
| Last Changed Date: 2018-10-30 11:42:03 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:23 -0400 (Sat, 13 Apr 2019).
| Package 1246/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ramwas 1.6.0 Andrey A Shabalin
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: ramwas |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/ramwas_1.6.0.tar.gz && rm -rf ramwas.buildbin-libdir && mkdir ramwas.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ramwas.buildbin-libdir ramwas_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL ramwas_1.6.0.zip && rm ramwas_1.6.0.tar.gz ramwas_1.6.0.zip |
| StartedAt: 2019-04-12 20:29:29 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:30:12 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 43.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/ramwas_1.6.0.tar.gz && rm -rf ramwas.buildbin-libdir && mkdir ramwas.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ramwas.buildbin-libdir ramwas_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL ramwas_1.6.0.zip && rm ramwas_1.6.0.tar.gz ramwas_1.6.0.zip
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install for i386
* installing *source* package 'ramwas' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c rw_c_code.c -o rw_c_code.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o ramwas.dll tmp.def rw_c_code.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/ramwas.buildbin-libdir/ramwas/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ramwas'
finding HTML links ... done
MakeBED html
QCs html
RaMWAS html
cachedRDSload html
findBestNpvs html
get html
getCpGset html
injectSNPsMAF html
finding level-2 HTML links ... done
insilicoFASTQ html
isAbsolutePath html
makefullpath html
manhattan html
mat2cols html
orthonormalizeCovariates html
parameterDump html
parameterPreprocess html
parametersFromFile html
pipeline html
plotCV html
plotFragmentSizeDistributionEstimate html
plotPC html
processCommandLine html
pvalue2qvalue html
qqplotFast html
ramwas0createArtificialData html
ramwasAnnotateLocations html
ramwasParameters html
rowcolSumSq html
rwDataClass-class html
subsetData html
testPhenotype html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'ramwas' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c rw_c_code.c -o rw_c_code.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o ramwas.dll tmp.def rw_c_code.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/ramwas.buildbin-libdir/ramwas/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ramwas' as ramwas_1.6.0.zip
* DONE (ramwas)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'ramwas' successfully unpacked and MD5 sums checked
In R CMD INSTALL