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INSTALL report for mogsa on tokay1

This page was generated on 2019-04-13 11:25:09 -0400 (Sat, 13 Apr 2019).

Package 988/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mogsa 1.16.0
Chen Meng
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/mogsa
Branch: RELEASE_3_8
Last Commit: 322a78f
Last Changed Date: 2018-10-30 11:41:57 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mogsa
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/mogsa_1.16.0.tar.gz && rm -rf mogsa.buildbin-libdir && mkdir mogsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mogsa.buildbin-libdir mogsa_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL mogsa_1.16.0.zip && rm mogsa_1.16.0.tar.gz mogsa_1.16.0.zip
StartedAt: 2019-04-12 19:23:32 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:24:34 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 62.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/mogsa_1.16.0.tar.gz && rm -rf mogsa.buildbin-libdir && mkdir mogsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mogsa.buildbin-libdir mogsa_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL mogsa_1.16.0.zip && rm mogsa_1.16.0.tar.gz mogsa_1.16.0.zip
###
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install for i386

* installing *source* package 'mogsa' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mogsa'
    finding HTML links ... done
    GIS                                     html  
    NCI60_4array_supdata                    html  
    NCI60_4arrays                           html  
    annotate.gs                             html  
    bootMbpca                               html  
    bootMbpcaK                              html  
    box.gs.feature                          html  
    combine-methods                         html  
    decompose.gs.group                      html  
    decompose.gs.ind                        html  
    deflat                                  html  
    distMoa                                 html  
    getmgsa                                 html  
    matpower                                html  
    mbpca                                   html  
    mgsa-class                              html  
    moGap                                   html  
    moa-class                               html  
    moa                                     html  
    moa.sup-class                           html  
    moaCoef                                 html  
    moaScore                                html  
    mogsa-package                           html  
    mogsa                                   html  
    msvd                                    html  
    nipalsSoftK                             html  
    pairwise.rv                             html  
    plot-methods                            html  
    plotGS                                  html  
    prepGraphite                            html  
    prepMsigDB                              html  
    prepSupMoa                              html  
    print-methods                           html  
    processOpt                              html  
    show-methods                            html  
    softK                                   html  
    summary-methods                         html  
    sup.moa                                 html  
    toMoa                                   html  
    wsvd                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'mogsa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mogsa' as mogsa_1.16.0.zip
* DONE (mogsa)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'mogsa' successfully unpacked and MD5 sums checked
In R CMD INSTALL