Back to Multiple platform build/check report for BioC 3.8 |
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This page was generated on 2019-04-16 11:54:06 -0400 (Tue, 16 Apr 2019).
Package 774/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
impute 1.56.0 Balasubramanian Narasimhan
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] |
Package: impute |
Version: 1.56.0 |
Command: rm -rf impute.buildbin-libdir && mkdir impute.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh impute_1.56.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R impute.buildbin-libdir |
StartedAt: 2019-04-16 04:14:35 -0400 (Tue, 16 Apr 2019) |
EndedAt: 2019-04-16 04:15:22 -0400 (Tue, 16 Apr 2019) |
EllapsedTime: 46.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: impute_1.56.0.tgz |
PackageFileSize: 644.5 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf impute.buildbin-libdir && mkdir impute.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh impute_1.56.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R impute.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=impute.buildbin-libdir impute_1.56.0.tar.gz' >>>>>>> * installing *source* package ‘impute’ ... ** libs gfortran -fPIC -g -O2 -c knnimpute.f -o knnimpute.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o impute.so knnimpute.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/impute.buildbin-libdir/impute/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (impute) >>>>>>> >>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs//impute.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/gfortran/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "impute.buildbin-libdir/impute/libs//impute.so" install_name_tool -change "/usr/local/gfortran/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "impute.buildbin-libdir/impute/libs//impute.so"