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INSTALL report for cytofkit on malbec1

This page was generated on 2019-04-16 11:51:04 -0400 (Tue, 16 Apr 2019).

Package 362/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cytofkit 1.14.0
Jinmiao Chen , Matthew Myint
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/cytofkit
Branch: RELEASE_3_8
Last Commit: 854ad07
Last Changed Date: 2018-10-30 11:41:56 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] ERROR  skipped 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: cytofkit
Version: 1.14.0
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL cytofkit
StartedAt: 2019-04-15 18:28:28 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:29:06 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 37.9 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL cytofkit
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘cytofkit’ ...
** libs
g++  -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++  -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2  -Wall -c jaccard_coeff.cpp -o jaccard_coeff.o
g++ -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o cytofkit.so RcppExports.o jaccard_coeff.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/cytofkit/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: Package 'cytofkit' is deprecated and will be removed from Bioconductor
  version 3.9
* DONE (cytofkit)