John D. Storey
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/biobroom |
| Branch: RELEASE_3_8 |
| Last Commit: f52a4b1 |
| Last Changed Date: 2018-10-30 11:41:59 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:26:03 -0400 (Sat, 13 Apr 2019).
| Package 131/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| biobroom 1.14.0 John D. Storey
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: biobroom |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/biobroom_1.14.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL biobroom_1.14.0.zip && rm biobroom_1.14.0.tar.gz biobroom_1.14.0.zip |
| StartedAt: 2019-04-12 18:57:44 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 18:58:14 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 30.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/biobroom_1.14.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL biobroom_1.14.0.zip && rm biobroom_1.14.0.tar.gz biobroom_1.14.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 217k 100 217k 0 0 5280k 0 --:--:-- --:--:-- --:--:-- 5736k
install for i386
* installing *source* package 'biobroom' ...
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'biobroom'
finding HTML links ... done
DESeq2_tidiers html
ExpressionSet_tidiers html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmp4Csx02/R.INSTALL950726c28a/biobroom/man/ExpressionSet_tidiers.Rd:17: file link 'assayDataElement' in package 'Biobase' does not exist and so has been treated as a topic
GRanges_tidiers html
MSnSet_tidiers html
SummarizedExperiment_tidiers html
biobroom html
edgeR_tidiers html
edge_tidiers html
hammer html
limma_tidiers html
list_tidiers html
qvalue_tidiers html
sva_tidiers html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'biobroom' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biobroom' as biobroom_1.14.0.zip
* DONE (biobroom)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'biobroom' successfully unpacked and MD5 sums checked
In R CMD INSTALL