Package: SIM

Version: 1.52.0

Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/SIM_1.52.0.tar.gz && rm -rf SIM.buildbin-libdir && mkdir SIM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIM.buildbin-libdir SIM_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL SIM_1.52.0.zip && rm SIM_1.52.0.tar.gz SIM_1.52.0.zip

StartedAt: 2019-04-12 18:52:32 -0400 (Fri, 12 Apr 2019)

EndedAt: 2019-04-12 18:53:23 -0400 (Fri, 12 Apr 2019)

EllapsedTime: 51.1 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/SIM_1.52.0.tar.gz && rm -rf SIM.buildbin-libdir && mkdir SIM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIM.buildbin-libdir SIM_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL SIM_1.52.0.zip && rm SIM_1.52.0.tar.gz SIM_1.52.0.zip
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install for i386

* installing *source* package 'SIM' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c withinWindow.c -o withinWindow.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o SIM.dll tmp.def withinWindow.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/SIM.buildbin-libdir/SIM/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SIM'
    finding HTML links ... done
    RESOURCERER.annotation.to.ID            html  
    SIM-package                             html  
    acgh.data                               html  
    assemble.data                           html  
    chrom.table                             html  
    expr.data                               html  
    getoverlappingregions                   html  
    impute.nas.by.surrounding               html  
    integrated.analysis                     html  
    link.metadata                           html  
    samples                                 html  
    sim.plot.overlapping.indep.dep.features
                                            html  
    sim.plot.pvals.on.genome                html  
    sim.plot.pvals.on.region                html  
    sim.plot.zoom.in                        html  
    sim.plot.zscore.heatmap                 html  
    sim.update.chrom.table                  html  
    tabulate.pvals                          html  
    tabulate.top.dep.features               html  
    tabulate.top.indep.features             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'SIM' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c withinWindow.c -o withinWindow.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SIM.dll tmp.def withinWindow.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/SIM.buildbin-libdir/SIM/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIM' as SIM_1.52.0.zip
* DONE (SIM)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'SIM' successfully unpacked and MD5 sums checked
In R CMD INSTALL