Manon Martin
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/PepsNMR |
| Branch: RELEASE_3_8 |
| Last Commit: aebf0b2 |
| Last Changed Date: 2019-03-08 06:09:00 -0400 (Fri, 08 Mar 2019) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 11:53:56 -0400 (Tue, 16 Apr 2019).
| Package 1141/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PepsNMR 1.0.2 Manon Martin
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | [ OK ] | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: PepsNMR |
| Version: 1.0.2 |
| Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD check --install=check:PepsNMR.install-out.txt --library=/home/biocbuild/bbs-3.8-bioc/R/library --no-vignettes --timings PepsNMR_1.0.2.tar.gz |
| StartedAt: 2019-04-16 02:02:42 -0400 (Tue, 16 Apr 2019) |
| EndedAt: 2019-04-16 02:06:10 -0400 (Tue, 16 Apr 2019) |
| EllapsedTime: 208.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: PepsNMR.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD check --install=check:PepsNMR.install-out.txt --library=/home/biocbuild/bbs-3.8-bioc/R/library --no-vignettes --timings PepsNMR_1.0.2.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.8-bioc/meat/PepsNMR.Rcheck’
* using R version 3.5.3 (2019-03-11)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘PepsNMR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘PepsNMR’ version ‘1.0.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘PepsNMR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
PEPSNMR-package 70.728 0.692 71.970
PreprocessingChain 67.152 0.120 67.352
Warping 10.404 0.012 10.422
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
PepsNMR.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL PepsNMR ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’ * installing *source* package ‘PepsNMR’ ... ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (PepsNMR)
PepsNMR.Rcheck/PepsNMR-Ex.timings
| name | user | system | elapsed | |
| Apodization | 0.816 | 0.032 | 1.007 | |
| BaselineCorrection | 0.552 | 0.008 | 0.563 | |
| Bucketing | 0.064 | 0.000 | 0.064 | |
| Draw | 1.452 | 0.000 | 1.456 | |
| DrawPCA | 0.66 | 0.00 | 0.66 | |
| DrawSignal | 0.692 | 0.004 | 0.696 | |
| FirstOrderPhaseCorrection | 0.040 | 0.000 | 0.039 | |
| FourierTransform | 0.032 | 0.000 | 0.032 | |
| GroupDelayCorrection | 0.040 | 0.004 | 0.046 | |
| InternalReferencing | 0.028 | 0.004 | 0.029 | |
| NegativeValuesZeroing | 0.012 | 0.000 | 0.010 | |
| Normalization | 0.008 | 0.000 | 0.008 | |
| PEPSNMR-package | 70.728 | 0.692 | 71.970 | |
| PreprocessingChain | 67.152 | 0.120 | 67.352 | |
| ReadFids | 0.220 | 0.000 | 0.217 | |
| RegionRemoval | 0.008 | 0.000 | 0.011 | |
| SolventSuppression | 0.112 | 0.008 | 0.121 | |
| Warping | 10.404 | 0.012 | 10.422 | |
| WindowSelection | 0.024 | 0.000 | 0.026 | |
| ZeroOrderPhaseCorrection | 0.072 | 0.000 | 0.073 | |
| ZoneAggregation | 0.408 | 0.008 | 0.655 | |