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BUILD BIN report for Pbase on tokay1

This page was generated on 2019-04-13 11:24:00 -0400 (Sat, 13 Apr 2019).

Package 1130/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Pbase 0.22.1
Sebastian Gibb
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/Pbase
Branch: RELEASE_3_8
Last Commit: 6ef1b9f
Last Changed Date: 2019-01-04 13:43:39 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Pbase
Version: 0.22.1
Command: rm -rf Pbase.buildbin-libdir && mkdir Pbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pbase.buildbin-libdir Pbase_0.22.1.tar.gz
StartedAt: 2019-04-13 07:45:14 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:46:11 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 57.5 seconds
RetCode: 0
Status:  OK  
PackageFile: Pbase_0.22.1.zip
PackageFileSize: 4.377 MiB

Command output

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### Running command:
###
###   rm -rf Pbase.buildbin-libdir && mkdir Pbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pbase.buildbin-libdir Pbase_0.22.1.tar.gz
###
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install for i386

* installing *source* package 'Pbase' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Pbase'
    finding HTML links ... done
    Pparams-class                           html  
    Proteins-class                          html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpo5qFKN/R.INSTALL3ec4c5165f2/Pbase/man/Proteins-class.Rd:121: file link 'proteins' in package 'ensembldb' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpo5qFKN/R.INSTALL3ec4c5165f2/Pbase/man/Proteins-class.Rd:126: file link 'listColumns' in package 'ensembldb' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpo5qFKN/R.INSTALL3ec4c5165f2/Pbase/man/Proteins-class.Rd:232: file link 'cleave' in package 'cleaver' does not exist and so has been treated as a topic
    calculateHeavyLabels                    html  
    coordinate-mapping-methods              html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpo5qFKN/R.INSTALL3ec4c5165f2/Pbase/man/coordinate-mapping-methods.Rd:124: file link 'mapToAlignments' in package 'GenomicAlignments' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpo5qFKN/R.INSTALL3ec4c5165f2/Pbase/man/coordinate-mapping-methods.Rd:129: file link 'mapToTranscripts' in package 'GenomicFeatures' does not exist and so has been treated as a topic
    etrid2grl                               html  
    isReverse                               html  
    p                                       html  
    plotAsAnnotationTrack                   html  
    proteinCoding-methods                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'Pbase' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Pbase' as Pbase_0.22.1.zip
* DONE (Pbase)
In R CMD INSTALL
In R CMD INSTALL