Jianhong Ou
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/InPAS |
| Branch: RELEASE_3_8 |
| Last Commit: cad7f1f |
| Last Changed Date: 2019-04-09 11:10:07 -0400 (Tue, 09 Apr 2019) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:25:04 -0400 (Sat, 13 Apr 2019).
| Package 776/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| InPAS 1.14.2 Jianhong Ou
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: InPAS |
| Version: 1.14.2 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/InPAS_1.14.2.tar.gz && rm -rf InPAS.buildbin-libdir && mkdir InPAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InPAS.buildbin-libdir InPAS_1.14.2.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL InPAS_1.14.2.zip && rm InPAS_1.14.2.tar.gz InPAS_1.14.2.zip |
| StartedAt: 2019-04-12 20:21:04 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:23:30 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 146.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/InPAS_1.14.2.tar.gz && rm -rf InPAS.buildbin-libdir && mkdir InPAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InPAS.buildbin-libdir InPAS_1.14.2.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL InPAS_1.14.2.zip && rm InPAS_1.14.2.tar.gz InPAS_1.14.2.zip
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install for i386
* installing *source* package 'InPAS' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'InPAS'
finding HTML links ... done
CPsite_estimation html
CPsites html
InPAS-package html
PAscore html
PAscore2 html
UTR3TotalCoverage html
UTR3eSet html
UTR3usage html
covThreshold html
coverageFromBedGraph html
coverageRate html
depthWeight html
distalAdj html
filterRes html
fisher.exact.test html
get.regions.coverage html
getCov html
getUTR3eSet html
getUTR3region html
inPAS html
lastCDSusage html
limmaAnalyze html
optimalSegmentation html
polishCPs html
prepare4GSEA html
proximalAdj html
proximalAdjByCleanUpdTSeq html
proximalAdjByPWM html
removeUTR3__UTR3 html
searchDistalCPs html
searchProximalCPs html
seqLen html
singleGroupAnalyze html
singleSampleAnalyze html
finding level-2 HTML links ... done
sortGR html
testUsage html
totalCoverage html
trimSeqnames html
usage4plot html
utr3.danRer10 html
utr3.hg19 html
utr3.mm10 html
utr3Annotation html
utr3UsageEstimation html
valley html
zScoreThrethold html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'InPAS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'InPAS' as InPAS_1.14.2.zip
* DONE (InPAS)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'InPAS' successfully unpacked and MD5 sums checked
In R CMD INSTALL