Back to Multiple platform build/check report for BioC 3.8
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

INSTALL report for FastqCleaner on malbec1

This page was generated on 2019-04-16 11:53:33 -0400 (Tue, 16 Apr 2019).

Package 507/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.0.0
Leandro Roser
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/FastqCleaner
Branch: RELEASE_3_8
Last Commit: f86fbf1
Last Changed Date: 2018-10-30 11:42:09 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: FastqCleaner
Version: 1.0.0
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL FastqCleaner
StartedAt: 2019-04-15 18:14:59 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:15:48 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 49.0 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL FastqCleaner
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘FastqCleaner’ ...
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c cpp_GC_content.cpp -o cpp_GC_content.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c cpp_base_content.cpp -o cpp_base_content.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c cpp_check_quality_threshold.cpp -o cpp_check_quality_threshold.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c cpp_create_stringvec.cpp -o cpp_create_stringvec.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include/ -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c cpp_which_true.cpp -o cpp_which_true.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o FastqCleaner.so RcppExports.o cpp_GC_content.o cpp_base_content.o cpp_check_quality_threshold.o cpp_create_stringvec.o cpp_which_true.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/FastqCleaner/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (FastqCleaner)