| Back to Multiple platform build/check report for BioC 3.8 |
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This page was generated on 2019-04-13 11:26:51 -0400 (Sat, 13 Apr 2019).
| Package 364/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CytoML 1.8.1 Mike Jiang
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: CytoML |
| Version: 1.8.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/CytoML_1.8.1.tar.gz && rm -rf CytoML.buildbin-libdir && mkdir CytoML.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CytoML.buildbin-libdir CytoML_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL CytoML_1.8.1.zip && rm CytoML_1.8.1.tar.gz CytoML_1.8.1.zip |
| StartedAt: 2019-04-12 20:09:11 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:10:02 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 51.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/CytoML_1.8.1.tar.gz && rm -rf CytoML.buildbin-libdir && mkdir CytoML.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CytoML.buildbin-libdir CytoML_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL CytoML_1.8.1.zip && rm CytoML_1.8.1.tar.gz CytoML_1.8.1.zip
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install for i386
* installing *source* package 'CytoML' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CytoML'
finding HTML links ... done
GatingSet2cytobank html
GatingSet2flowJo html
addCustomInfo html
compare.counts html
compensate-GatingSet-graphGML-method html
constructTree html
cytobank2GatingSet html
divaWorkspace-class html
finding level-2 HTML links ... done
extend html
gating-methods html
getChildren-graphGML-character-method html
getCompensationMatrices-graphGML-method
html
getGate-graphGML-character-method html
getNodes-graphGML-method html
getParent-graphGML-character-method html
getTransformations-graphGML-method html
graphGML-class html
matchPath html
openDiva html
parse.gateInfo html
plot-graphGML-missing-method html
range.GatingHierarchy html
read.gatingML.cytobank html
show-graphGML-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'CytoML' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CytoML' as CytoML_1.8.1.zip
* DONE (CytoML)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'CytoML' successfully unpacked and MD5 sums checked
In R CMD INSTALL