Jacob Carey
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/CNPBayes |
| Branch: RELEASE_3_8 |
| Last Commit: 01190fc |
| Last Changed Date: 2018-10-30 11:41:59 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 11:59:05 -0400 (Tue, 16 Apr 2019).
| Package 292/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CNPBayes 1.12.0 Jacob Carey
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: CNPBayes |
| Version: 1.12.0 |
| Command: rm -rf CNPBayes.buildbin-libdir && mkdir CNPBayes.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNPBayes_1.12.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CNPBayes.buildbin-libdir |
| StartedAt: 2019-04-16 03:51:58 -0400 (Tue, 16 Apr 2019) |
| EndedAt: 2019-04-16 03:53:29 -0400 (Tue, 16 Apr 2019) |
| EllapsedTime: 91.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CNPBayes_1.12.0.tgz |
| PackageFileSize: 5.057 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf CNPBayes.buildbin-libdir && mkdir CNPBayes.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNPBayes_1.12.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CNPBayes.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=CNPBayes.buildbin-libdir CNPBayes_1.12.0.tar.gz' >>>>>>> * installing *source* package ‘CNPBayes’ ... ** libs clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c miscfunctions.cpp -o miscfunctions.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c multibatch.cpp -o multibatch.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c multibatch_pooledvar.cpp -o multibatch_pooledvar.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c multibatch_reduced.cpp -o multibatch_reduced.o clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c pooledvar_reduced.cpp -o pooledvar_reduced.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNPBayes.so RcppExports.o miscfunctions.o multibatch.o multibatch_pooledvar.o multibatch_reduced.o pooledvar_reduced.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/CNPBayes.buildbin-libdir/CNPBayes/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘alpha’ in package ‘CNPBayes’ Creating a generic function from function ‘sigma’ in package ‘CNPBayes’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (CNPBayes) >>>>>>> >>>>>>> FIXING LINKS FOR CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/gfortran/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so" install_name_tool -change "/usr/local/gfortran/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "CNPBayes.buildbin-libdir/CNPBayes/libs//CNPBayes.so"