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BUILD report for BSgenome on malbec1

This page was generated on 2019-04-16 11:48:11 -0400 (Tue, 16 Apr 2019).

Package 180/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BSgenome 1.50.0
H. Pagès
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/BSgenome
Branch: RELEASE_3_8
Last Commit: 4391075
Last Changed Date: 2018-10-30 11:41:43 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK [ OK ] WARNINGS UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: BSgenome
Version: 1.50.0
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome
StartedAt: 2019-04-15 18:41:49 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:43:23 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 94.0 seconds
RetCode: 0
Status:  OK 
PackageFile: BSgenome_1.50.0.tar.gz
PackageFileSize: 5.784 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome
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* checking for file ‘BSgenome/DESCRIPTION’ ... OK
* preparing ‘BSgenome’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘BSgenome/inst/pkgtemplates/BSgenome_datapkg/inst/extdata’ is empty
WARNING: directory ‘BSgenome/inst/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata’ is empty
* building ‘BSgenome_1.50.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = "gzip", compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘BSgenome/inst/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh’