Aaron Lun
| Snapshot Date: 2018-09-28 16:46:21 -0400 (Fri, 28 Sep 2018) |
| URL: https://git.bioconductor.org/packages/kmknn |
| Branch: master |
| Last Commit: 9f65263 |
| Last Changed Date: 2018-07-23 11:34:58 -0400 (Mon, 23 Jul 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2018-09-29 10:45:42 -0400 (Sat, 29 Sep 2018).
| Package 803/1611 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| kmknn 0.99.16 Aaron Lun
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: kmknn |
| Version: 0.99.16 |
| Command: rm -rf kmknn.buildbin-libdir && mkdir kmknn.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh kmknn_0.99.16.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R kmknn.buildbin-libdir |
| StartedAt: 2018-09-29 04:14:39 -0400 (Sat, 29 Sep 2018) |
| EndedAt: 2018-09-29 04:15:27 -0400 (Sat, 29 Sep 2018) |
| EllapsedTime: 47.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: kmknn_0.99.16.tgz |
| PackageFileSize: 393.2 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf kmknn.buildbin-libdir && mkdir kmknn.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh kmknn_0.99.16.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R kmknn.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=kmknn.buildbin-libdir kmknn_0.99.16.tar.gz' >>>>>>> * installing *source* package ‘kmknn’ ... ** libs clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c find_knn.cpp -o find_knn.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c find_neighbors.cpp -o find_neighbors.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c init.cpp -o init.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c objects.cpp -o objects.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c query_knn.cpp -o query_knn.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c query_neighbors.cpp -o query_neighbors.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c utils.cpp -o utils.o clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o kmknn.so find_knn.o find_neighbors.o init.o objects.o query_knn.o query_neighbors.o utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/kmknn.buildbin-libdir/kmknn/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (kmknn) >>>>>>> >>>>>>> FIXING LINKS FOR kmknn.buildbin-libdir/kmknn/libs//kmknn.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "kmknn.buildbin-libdir/kmknn/libs//kmknn.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "kmknn.buildbin-libdir/kmknn/libs//kmknn.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "kmknn.buildbin-libdir/kmknn/libs//kmknn.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "kmknn.buildbin-libdir/kmknn/libs//kmknn.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "kmknn.buildbin-libdir/kmknn/libs//kmknn.so"