Thomas J. Hardcastle
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/clusterSeq |
| Branch: RELEASE_3_8 |
| Last Commit: bc978ee |
| Last Changed Date: 2018-10-30 11:42:03 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:23 -0400 (Sat, 13 Apr 2019).
| Package 280/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| clusterSeq 1.6.0 Thomas J. Hardcastle
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: clusterSeq |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/clusterSeq_1.6.0.tar.gz && rm -rf clusterSeq.buildbin-libdir && mkdir clusterSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterSeq.buildbin-libdir clusterSeq_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL clusterSeq_1.6.0.zip && rm clusterSeq_1.6.0.tar.gz clusterSeq_1.6.0.zip |
| StartedAt: 2019-04-12 19:51:10 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:51:54 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 44.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/clusterSeq_1.6.0.tar.gz && rm -rf clusterSeq.buildbin-libdir && mkdir clusterSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterSeq.buildbin-libdir clusterSeq_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL clusterSeq_1.6.0.zip && rm clusterSeq_1.6.0.tar.gz clusterSeq_1.6.0.zip
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install for i386
* installing *source* package 'clusterSeq' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'clusterSeq'
finding HTML links ... done
associatePosteriors html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/associatePosteriors.Rd:19: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/associatePosteriors.Rd:33: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
cD.ratThymus-data html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/cD.ratThymus-data.Rd:9: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/cD.ratThymus-data.Rd:19: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/cD.ratThymus-data.Rd:17: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
clusterSeq-package html
kCluster html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/kCluster.Rd:20: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmqlUPf/R.INSTALL1e185fc34fd8/clusterSeq/man/kCluster.Rd:70: file link 'countData' in package 'baySeq' does not exist and so has been treated as a topic
makeClusters html
makeClustersFF html
plotCluster html
ratThymus-data html
wallace html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'clusterSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clusterSeq' as clusterSeq_1.6.0.zip
* DONE (clusterSeq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'clusterSeq' successfully unpacked and MD5 sums checked
In R CMD INSTALL