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This page was generated on 2019-04-16 11:51:14 -0400 (Tue, 16 Apr 2019).
| Package 662/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Siddhartha Bagaria
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | [ OK ] | ERROR | skipped | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | ERROR | skipped | skipped |
| Package: GoogleGenomics |
| Version: 2.4.0 |
| Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL GoogleGenomics |
| StartedAt: 2019-04-15 18:21:01 -0400 (Mon, 15 Apr 2019) |
| EndedAt: 2019-04-15 18:21:29 -0400 (Mon, 15 Apr 2019) |
| EllapsedTime: 27.8 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL GoogleGenomics ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’ * installing *source* package ‘GoogleGenomics’ ... /home/biocbuild/bbs-3.8-bioc/R/bin/Rcmd: 62: exec: CONFIG: not found checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking for pkg-config... 0 checking if ProtoBuf version >= 3.0.0... "no" configure: WARNING: " gRPC installation could not be found, or protocol buffer library is not >= 3.0.0. If your installation is in a non-standard location, please see installation instructions at https://github.com/Bioconductor/GoogleGenomics/blob/master/README.rst " configure: creating ./config.status config.status: creating src/Makevars ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -fpic -g -O2 -Wall -c init.cc -o init.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o GoogleGenomics.so init.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.8-bioc/R/library/GoogleGenomics/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded Configured public API key. Warning: Package 'GoogleGenomics' is deprecated and will be removed from Bioconductor version 3.9 * DONE (GoogleGenomics)