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BUILD WEB VIG report for RnaSeqGeneEdgeRQL on malbec2

This page was generated on 2018-05-18 12:48:07 -0400 (Fri, 18 May 2018).

Package 17/21HostnameOS / ArchINSTALLBUILDBUILD WEB VIG
RnaSeqGeneEdgeRQL 1.2.3
Yunshun Chen , Gordon Smyth
Snapshot Date: 2018-05-18 07:35:08 -0400 (Fri, 18 May 2018)
URL: https://git.bioconductor.org/packages/RnaSeqGeneEdgeRQL
Branch: RELEASE_3_7
Last Commit: 6295dd7
Last Changed Date: 2018-05-13 20:19:40 -0400 (Sun, 13 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: RnaSeqGeneEdgeRQL
Version: 1.2.3
Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", ".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.R")'
StartedAt: 2018-05-18 08:50:02 -0400 (Fri, 18 May 2018)
EndedAt: 2018-05-18 08:51:10 -0400 (Fri, 18 May 2018)
EllapsedTime: 68.6 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", ".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.R")'
###
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> rmarkdown::render(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", output_format="BiocStyle:::html_fragment")


processing file: edgeRQL.Rmd

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trying URL 'http://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE60450&format=file&file=GSE60450_Lactation-GenewiseCounts.txt.gz'
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output file: edgeRQL.knit.md

/usr/bin/pandoc +RTS -K512m -RTS edgeRQL.utf8.md --to html4 --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash+smart --output edgeRQL.html --email-obfuscation none --self-contained --wrap preserve --standalone --section-divs --table-of-contents --toc-depth 3 --template /home/biocbuild/bbs-3.7-bioc/R/library/BiocStyle/resources/fragment.html --no-highlight --number-sections --mathjax --variable 'mathjax-url:https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --filter /usr/bin/pandoc-citeproc 

Output created: edgeRQL.html
> 
> 
> knitr::purl(".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd", ".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.R")


processing file: .buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.Rmd

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output file: .buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.R

[1] ".buildwebvig/RnaSeqGeneEdgeRQL/edgeRQL.R"
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