Back to Multiple platform build/check report for BioC 3.7 experimental data |
This page was generated on 2018-10-16 14:17:23 -0400 (Tue, 16 Oct 2018).
Package 45/342 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
ceuhm3 0.18.0 VJ Carey
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | [ OK ] |
Package: ceuhm3 |
Version: 0.18.0 |
Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD check --install=check:ceuhm3.install-out.txt --library=/home/biocbuild/bbs-3.7-bioc/R/library --no-vignettes --timings ceuhm3_0.18.0.tar.gz |
StartedAt: 2018-10-16 10:41:55 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 10:43:58 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 122.1 seconds |
RetCode: 0 |
Status: OK |
CheckDir: ceuhm3.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD check --install=check:ceuhm3.install-out.txt --library=/home/biocbuild/bbs-3.7-bioc/R/library --no-vignettes --timings ceuhm3_0.18.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.7-data-experiment/meat/ceuhm3.Rcheck’ * using R version 3.5.1 Patched (2018-07-12 r74967) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘ceuhm3/DESCRIPTION’ ... OK * this is package ‘ceuhm3’ version ‘0.18.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ceuhm3’ can be installed ... OK * checking installed package size ... NOTE installed size is 45.2Mb sub-directories of 1Mb or more: data 25.9Mb parts 19.1Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... NOTE Namespace in Imports field not imported from: ‘GGtools’ All declared Imports should be used. Package in Depends field not imported from: ‘GGBase’ These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE File ‘ceuhm3/R/zzz.R’: .onLoad calls: packageStartupMessage(paste("To get a tailored smlSet, use getSS(\"", pkgname, "\", [chrvec])", sep = "")) packageStartupMessage("available chromosomes are named ", selectSome(cn)) See section ‘Good practice’ in '?.onAttach'. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK Examples with CPU or elapsed time > 5s user system elapsed ceuhm3-package 9.608 0.288 10.839 * checking PDF version of manual ... OK * DONE Status: 4 NOTEs See ‘/home/biocbuild/bbs-3.7-data-experiment/meat/ceuhm3.Rcheck/00check.log’ for details.
ceuhm3.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL ceuhm3 ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.7-bioc/R/library’ * installing *source* package ‘ceuhm3’ ... ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (ceuhm3)
ceuhm3.Rcheck/ceuhm3-Ex.timings
name | user | system | elapsed | |
ceuhm3-package | 9.608 | 0.288 | 10.839 | |