Joseph N Paulson
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/yarn |
| Branch: RELEASE_3_7 |
| Last Commit: 19d1b2e |
| Last Changed Date: 2018-04-30 10:35:44 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:43:10 -0400 (Wed, 17 Oct 2018).
| Package 1558/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| yarn 1.6.0 Joseph N Paulson
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: yarn |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/yarn_1.6.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL yarn_1.6.0.zip && rm yarn_1.6.0.tar.gz yarn_1.6.0.zip |
| StartedAt: 2018-10-16 20:22:40 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:23:29 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 48.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/yarn_1.6.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL yarn_1.6.0.zip && rm yarn_1.6.0.tar.gz yarn_1.6.0.zip
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install for i386
* installing *source* package 'yarn' ...
It is recommended to use 'given' instead of 'middle'.
It is recommended to use 'given' instead of 'middle'.
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'yarn'
finding HTML links ... done
annotateFromBiomart html
bladder html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpUJRXH4/R.INSTALL275c64e330bd/yarn/man/bladder.Rd:7: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
checkMisAnnotation html
checkTissuesToMerge html
downloadGTEx html
extractMatrix html
filterGenes html
filterLowGenes html
filterMissingGenes html
filterSamples html
normalizeTissueAware html
plotCMDS html
plotDensity html
plotHeatmap html
qsmooth html
qstats html
skin html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpUJRXH4/R.INSTALL275c64e330bd/yarn/man/skin.Rd:7: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'yarn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yarn' as yarn_1.6.0.zip
* DONE (yarn)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'yarn' successfully unpacked and MD5 sums checked
In R CMD INSTALL