Zuguang Gu
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/rGREAT |
| Branch: RELEASE_3_7 |
| Last Commit: d2c2d1a |
| Last Changed Date: 2018-06-19 10:16:40 -0400 (Tue, 19 Jun 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:39:59 -0400 (Wed, 17 Oct 2018).
| Package 1233/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| rGREAT 1.12.1 Zuguang Gu
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: rGREAT |
| Version: 1.12.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/rGREAT_1.12.1.tar.gz && rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rGREAT.buildbin-libdir rGREAT_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL rGREAT_1.12.1.zip && rm rGREAT_1.12.1.tar.gz rGREAT_1.12.1.zip |
| StartedAt: 2018-10-16 19:23:58 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 19:24:44 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 45.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/rGREAT_1.12.1.tar.gz && rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rGREAT.buildbin-libdir rGREAT_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL rGREAT_1.12.1.zip && rm rGREAT_1.12.1.tar.gz rGREAT_1.12.1.zip
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install for i386
* installing *source* package 'rGREAT' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'rGREAT'
finding HTML links ... done
GreatJob-class html
availableCategories-GreatJob-method html
availableOntologies-GreatJob-method html
getEnrichmentTables-GreatJob-method html
plotRegionGeneAssociationGraphs-GreatJob-method
html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp4S2COu/R.INSTALL14d877c919aa/rGREAT/man/plotRegionGeneAssociationGraphs-GreatJob-method.rd:39: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
submitGreatJob html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp4S2COu/R.INSTALL14d877c919aa/rGREAT/man/submitGreatJob.rd:26: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp4S2COu/R.INSTALL14d877c919aa/rGREAT/man/submitGreatJob.rd:27: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'rGREAT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rGREAT' as rGREAT_1.12.1.zip
* DONE (rGREAT)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'rGREAT' successfully unpacked and MD5 sums checked
In R CMD INSTALL