Back to Multiple platform build/check report for BioC 3.7
ABCDEFGHIJKLMNOP[Q]RSTUVWXYZ

INSTALL report for qusage on tokay2

This page was generated on 2018-10-17 08:37:36 -0400 (Wed, 17 Oct 2018).

Package 1168/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
qusage 2.14.0
Christopher Bolen
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/qusage
Branch: RELEASE_3_7
Last Commit: 94f5a77
Last Changed Date: 2018-04-30 10:35:31 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: qusage
Version: 2.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/qusage_2.14.0.tar.gz && rm -rf qusage.buildbin-libdir && mkdir qusage.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qusage.buildbin-libdir qusage_2.14.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL qusage_2.14.0.zip && rm qusage_2.14.0.tar.gz qusage_2.14.0.zip
StartedAt: 2018-10-16 19:10:15 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:11:33 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 78.6 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/qusage_2.14.0.tar.gz && rm -rf qusage.buildbin-libdir && mkdir qusage.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qusage.buildbin-libdir qusage_2.14.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL qusage_2.14.0.zip && rm qusage_2.14.0.tar.gz qusage_2.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 93 8775k   93 8176k    0     0  50.8M      0 --:--:-- --:--:-- --:--:-- 52.8M
100 8775k  100 8775k    0     0  52.8M      0 --:--:-- --:--:-- --:--:-- 54.5M

install for i386

* installing *source* package 'qusage' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'qusage'
    finding HTML links ... done
    GeneSets                                html  
    QSarray-class                           html  
    aggregateGeneSet                        html  
    calcBayesCI                             html  
    calcVIF                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpYh678N/R.INSTALL14545fdebd/qusage/man/calcVIF.Rd:12: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    combinePDFs                             html  
    eset.full                               html  
    fluVaccine                              html  
    getXcoords                              html  
    makeComparison                          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpYh678N/R.INSTALL14545fdebd/qusage/man/makeComparison.Rd:13: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    newQSarray                              html  
    pVal                                    html  
    plotCIs                                 html  
    plotCIsGenes                            html  
    plotCombinedPDF                         html  
    plotDensityCurves                       html  
    plotGeneSetDistributions                html  
    qgen                                    html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpYh678N/R.INSTALL14545fdebd/qusage/man/qgen.Rd:21: file link 'corStruct' in package 'nlme' does not exist and so has been treated as a topic
    qsTable                                 html  
    qusage                                  html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpYh678N/R.INSTALL14545fdebd/qusage/man/qusage.Rd:12: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    read.gmt                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'qusage' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'qusage' as qusage_2.14.0.zip
* DONE (qusage)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'qusage' successfully unpacked and MD5 sums checked
In R CMD INSTALL