Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:37:10 -0400 (Wed, 17 Oct 2018).
Package 1094/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
piano 1.20.1 Leif Varemo
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: piano |
Version: 1.20.1 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/piano_1.20.1.tar.gz && rm -rf piano.buildbin-libdir && mkdir piano.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=piano.buildbin-libdir piano_1.20.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL piano_1.20.1.zip && rm piano_1.20.1.tar.gz piano_1.20.1.zip |
StartedAt: 2018-10-16 19:15:54 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 19:17:14 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 79.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/piano_1.20.1.tar.gz && rm -rf piano.buildbin-libdir && mkdir piano.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=piano.buildbin-libdir piano_1.20.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL piano_1.20.1.zip && rm piano_1.20.1.tar.gz piano_1.20.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 908k 100 908k 0 0 14.9M 0 --:--:-- --:--:-- --:--:-- 16.7M install for i386 * installing *source* package 'piano' ... ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'piano' finding HTML links ... done GSAheatmap html GSAsummaryTable html consensusHeatmap html consensusScores html diffExp html finding level-2 HTML links ... done Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/diffExp.Rd:75: file link 'limma' in package 'limma' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/diffExp.Rd:143: file link 'limma' in package 'limma' does not exist and so has been treated as a topic extractFactors html geneSetSummary html gsa_input html gsa_results html loadGSC html loadMAdata html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/loadMAdata.Rd:129: file link 'yeast2.db' in package 'yeast2.db' does not exist and so has been treated as a topic networkPlot html piano-package html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/piano-package.Rd:25: file link 'limma-package' in package 'limma' does not exist and so has been treated as a topic polarPlot html runGSA html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/runGSA.Rd:250: file link 'HTSanalyzeR-package' in package 'HTSanalyzeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpycai5l/R.INSTALL1b847d626dc8/piano/man/runGSA.Rd:252: file link 'limma' in package 'limma' does not exist and so has been treated as a topic runGSAhyper html runQC html writeFilesForKiwi html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'piano' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'piano' as piano_1.20.1.zip * DONE (piano) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'piano' successfully unpacked and MD5 sums checked In R CMD INSTALL