Michael Love
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/exomeCopy |
| Branch: RELEASE_3_7 |
| Last Commit: 263b7ab |
| Last Changed Date: 2018-04-30 10:35:22 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:35:52 -0400 (Wed, 17 Oct 2018).
| Package 467/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| exomeCopy 1.26.0 Michael Love
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: exomeCopy |
| Version: 1.26.0 |
| Command: rm -rf exomeCopy.buildbin-libdir && mkdir exomeCopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=exomeCopy.buildbin-libdir exomeCopy_1.26.0.tar.gz |
| StartedAt: 2018-10-17 06:18:42 -0400 (Wed, 17 Oct 2018) |
| EndedAt: 2018-10-17 06:19:05 -0400 (Wed, 17 Oct 2018) |
| EllapsedTime: 22.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: exomeCopy_1.26.0.zip |
| PackageFileSize: 625.9 KiB |
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### Running command:
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### rm -rf exomeCopy.buildbin-libdir && mkdir exomeCopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=exomeCopy.buildbin-libdir exomeCopy_1.26.0.tar.gz
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install for i386
* installing *source* package 'exomeCopy' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c exomeCopy.c -o exomeCopy.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o exomeCopy.dll tmp.def exomeCopy.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/exomeCopy.buildbin-libdir/exomeCopy/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'exomeCopy'
finding HTML links ... done
ExomeCopy-class html
compileCopyCountSegments html
copyCountSegments html
countBamInGRanges html
finding level-2 HTML links ... done
exomeCopy-package html
exomeCopy html
exomecounts html
generateBackground html
getGCcontent html
negLogLike html
plot.exomeCopyObject html
plotCompiledCNV html
subdivideGRanges html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'exomeCopy' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c exomeCopy.c -o exomeCopy.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o exomeCopy.dll tmp.def exomeCopy.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/exomeCopy.buildbin-libdir/exomeCopy/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'exomeCopy' as exomeCopy_1.26.0.zip
* DONE (exomeCopy)
In R CMD INSTALL
In R CMD INSTALL