Daniel Kosztyla
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/cancerclass |
| Branch: RELEASE_3_7 |
| Last Commit: b3db24f |
| Last Changed Date: 2018-04-30 10:35:25 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:50:30 -0400 (Wed, 17 Oct 2018).
| Package 183/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cancerclass 1.24.0 Daniel Kosztyla
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | [ OK ] | |
| Package: cancerclass |
| Version: 1.24.0 |
| Command: rm -rf cancerclass.buildbin-libdir && mkdir cancerclass.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh cancerclass_1.24.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R cancerclass.buildbin-libdir |
| StartedAt: 2018-10-17 01:01:48 -0400 (Wed, 17 Oct 2018) |
| EndedAt: 2018-10-17 01:02:39 -0400 (Wed, 17 Oct 2018) |
| EllapsedTime: 50.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: cancerclass_1.24.0.tgz |
| PackageFileSize: 1.595 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf cancerclass.buildbin-libdir && mkdir cancerclass.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh cancerclass_1.24.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R cancerclass.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=cancerclass.buildbin-libdir cancerclass_1.24.0.tar.gz' >>>>>>> * installing *source* package ‘cancerclass’ ... ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c copa.c -o copa.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cor.c -o cor.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c fc.c -o fc.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c help.c -o help.o help.c:335:7: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign] var=var; ///(to-from-1); R=var(N-1) => /(count-1) ˜˜˜^˜˜˜ 1 warning generated. clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c ort.c -o ort.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c os.c -o os.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c shift.c -o shift.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c statistics.c -o statistics.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c student.c -o student.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c throw.c -o throw.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c welch.c -o welch.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c wilcox.c -o wilcox.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o cancerclass.so copa.o cor.o fc.o help.o ort.o os.o shift.o statistics.o student.o throw.o welch.o wilcox.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.7-bioc/meat/cancerclass.buildbin-libdir/cancerclass/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (cancerclass) >>>>>>> >>>>>>> FIXING LINKS FOR cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "cancerclass.buildbin-libdir/cancerclass/libs//cancerclass.so"