John D. Storey
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/biobroom |
| Branch: RELEASE_3_7 |
| Last Commit: 5a2a7a8 |
| Last Changed Date: 2018-08-09 12:15:21 -0400 (Thu, 09 Aug 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:41:19 -0400 (Wed, 17 Oct 2018).
| Package 123/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| biobroom 1.12.1 John D. Storey
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: biobroom |
| Version: 1.12.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/biobroom_1.12.1.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL biobroom_1.12.1.zip && rm biobroom_1.12.1.tar.gz biobroom_1.12.1.zip |
| StartedAt: 2018-10-16 19:11:22 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 19:12:01 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 39.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/biobroom_1.12.1.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL biobroom_1.12.1.zip && rm biobroom_1.12.1.tar.gz biobroom_1.12.1.zip
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install for i386
* installing *source* package 'biobroom' ...
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'biobroom'
finding HTML links ... done
DESeq2_tidiers html
ExpressionSet_tidiers html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpw9nvBX/R.INSTALL6b8244b67b7/biobroom/man/ExpressionSet_tidiers.Rd:17: file link 'assayDataElement' in package 'Biobase' does not exist and so has been treated as a topic
GRanges_tidiers html
MSnSet_tidiers html
SummarizedExperiment_tidiers html
biobroom html
edgeR_tidiers html
edge_tidiers html
hammer html
limma_tidiers html
list_tidiers html
qvalue_tidiers html
sva_tidiers html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'biobroom' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biobroom' as biobroom_1.12.1.zip
* DONE (biobroom)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'biobroom' successfully unpacked and MD5 sums checked
In R CMD INSTALL