Peter Blattmann
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/SWATH2stats |
| Branch: RELEASE_3_7 |
| Last Commit: 0a5ebec |
| Last Changed Date: 2018-06-15 11:08:09 -0400 (Fri, 15 Jun 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:41:14 -0400 (Wed, 17 Oct 2018).
| Package 1453/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SWATH2stats 1.10.2 Peter Blattmann
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SWATH2stats |
| Version: 1.10.2 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SWATH2stats_1.10.2.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.10.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.10.2.zip && rm SWATH2stats_1.10.2.tar.gz SWATH2stats_1.10.2.zip |
| StartedAt: 2018-10-16 18:58:18 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 18:59:16 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 58.0 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SWATH2stats_1.10.2.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.10.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.10.2.zip && rm SWATH2stats_1.10.2.tar.gz SWATH2stats_1.10.2.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2642k 100 2642k 0 0 33.1M 0 --:--:-- --:--:-- --:--:-- 36.3M
install for i386
* installing *source* package 'SWATH2stats' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SWATH2stats'
finding HTML links ... done
MSstats_data html
OpenSWATH_data html
SWATH2stats-package html
Spyogenes html
Study_design html
assess_decoy_rate html
assess_fdr_byrun html
assess_fdr_overall html
convert4MSstats html
convert4PECA html
convert4aLFQ html
convert4mapDIA html
convert4pythonscript html
count_analytes html
disaggregate html
filter_all_peptides html
filter_mscore_all html
filter_mscore_fdr html
filter_on_max_peptides html
filter_on_min_peptides html
filter_proteotypic_peptides html
import_data html
mscore4assayfdr html
mscore4pepfdr html
mscore4protfdr html
plot.fdr_cube html
plot.fdr_table html
plot_correlation_between_samples html
plot_variation html
plot_variation_vs_total html
reduce_OpenSWATH_output html
removeDecoyProteins html
sample_annotation html
transform_MSstats_OpenSWATH html
unifyProteinGroupLabels html
write_matrix_peptides html
write_matrix_proteins html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'SWATH2stats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SWATH2stats' as SWATH2stats_1.10.2.zip
* DONE (SWATH2stats)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'SWATH2stats' successfully unpacked and MD5 sums checked
In R CMD INSTALL