Nolwenn Le Meur
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/SLGI |
| Branch: RELEASE_3_7 |
| Last Commit: 52bd395 |
| Last Changed Date: 2018-04-30 10:35:08 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:33:39 -0400 (Wed, 17 Oct 2018).
| Package 1388/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SLGI 1.40.0 Nolwenn Le Meur
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SLGI |
| Version: 1.40.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SLGI_1.40.0.tar.gz && rm -rf SLGI.buildbin-libdir && mkdir SLGI.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SLGI.buildbin-libdir SLGI_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SLGI_1.40.0.zip && rm SLGI_1.40.0.tar.gz SLGI_1.40.0.zip |
| StartedAt: 2018-10-16 19:48:22 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 19:49:43 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 81.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SLGI_1.40.0.tar.gz && rm -rf SLGI.buildbin-libdir && mkdir SLGI.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SLGI.buildbin-libdir SLGI_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SLGI_1.40.0.zip && rm SLGI_1.40.0.tar.gz SLGI_1.40.0.zip
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install for i386
* installing *source* package 'SLGI' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
** help
*** installing help indices
converting help for package 'SLGI'
finding HTML links ... done
Atong html
AtongFnDomain html
AtongPair html
Boeke html
SDL html
SGA html
SGD.SL html
TFmat html
byComplex html
comemberIn html
compare html
congruence html
createSquareMatrix html
dSLAM.GPL1444 html
domainDist html
essglist html
getInteraction html
getSharedDomains html
getSharedInteraction html
getTestedPairs html
getUniquePairs html
gi2005 html
gi2007 html
gi2Interactome html
hyperG html
iSummary html
modelSLGI html
normInteraction html
plot html
seqMatcherAlign html
sharedBy html
sharedInt html
siResult-class html
test2Interact html
topInteraction html
twoWayTable html
withinComplex html
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
In R CMD INSTALL
install for x64
* installing *source* package 'SLGI' ...
** testing if installed package can be loaded
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
* MD5 sums
packaged installation of 'SLGI' as SLGI_1.40.0.zip
* DONE (SLGI)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'SLGI' successfully unpacked and MD5 sums checked
In R CMD INSTALL