Alexander Pico
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/RCy3 |
| Branch: RELEASE_3_7 |
| Last Commit: fa8a68d |
| Last Changed Date: 2018-08-10 19:36:47 -0400 (Fri, 10 Aug 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:41:17 -0400 (Wed, 17 Oct 2018).
| Package 1201/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RCy3 2.0.88 Alexander Pico
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: RCy3 |
| Version: 2.0.88 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/RCy3_2.0.88.tar.gz && rm -rf RCy3.buildbin-libdir && mkdir RCy3.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCy3.buildbin-libdir RCy3_2.0.88.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL RCy3_2.0.88.zip && rm RCy3_2.0.88.tar.gz RCy3_2.0.88.zip |
| StartedAt: 2018-10-16 18:53:38 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 18:56:36 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 177.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/RCy3_2.0.88.tar.gz && rm -rf RCy3.buildbin-libdir && mkdir RCy3.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCy3.buildbin-libdir RCy3_2.0.88.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL RCy3_2.0.88.zip && rm RCy3_2.0.88.tar.gz RCy3_2.0.88.zip
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install for i386
* installing *source* package 'RCy3' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RCy3'
finding HTML links ... done
AddToGroup html
CytoscapeConnection-deprecated html
CytoscapeWindow-deprecated html
RCy3 html
RemoveFromGroup html
addCyEdge-defunct html
addCyEdges html
addCyNode-defunct html
addCyNodes html
addGraphToGraph-defunct html
clearEdgePropertyBypass html
clearNetworkCenterBypass html
clearNetworkPropertyBypass html
clearNetworkZoomBypass html
clearNodeOpacityBypass html
clearNodePropertyBypass html
clearSelection html
cloneNetwork html
closeSession html
collapseGroup html
commandEcho html
commandOpenDialog html
commandPause html
commandQuit html
commandRunFile html
commandSleep html
commandsAPI html
commandsGET html
commandsHelp html
commandsPOST html
commandsRun html
connectToNewestCyWindow-defunct html
copyCytoscapeNetwork-deprecated html
copyVisualStyle html
createGraphFromNetwork html
createGroup html
createIgraphFromNetwork html
createNetworkFromDataFrames html
createNetworkFromGraph html
createNetworkFromIgraph html
createSubnetwork html
createVisualStyle html
createWindow-deprecated html
createWindowFromSelection-deprecated html
cy2.edge.names-defunct html
cyPlot-defunct html
cybrowserClose html
cybrowserDialog html
cybrowserHide html
cybrowserList html
cybrowserSend html
cybrowserShow html
cybrowserVersion html
cyrestAPI html
cyrestDELETE html
cyrestGET html
cyrestPOST html
cyrestPUT html
cytoscapeApiVersions html
cytoscapeFreeMemory html
cytoscapeMemoryStatus html
cytoscapeNumberOfCores html
cytoscapePing html
cytoscapeVersionInfo html
deleteAllNetworks html
deleteAllWindows-deprecated html
deleteEdgeAttribute-deprecated html
deleteGroup html
deleteNetwork html
deleteNodeAttribute-deprecated html
deleteSelectedEdges html
deleteSelectedNodes html
deleteTableColumn html
deleteWindow-deprecated html
demoSimpleGraph-defunct html
diffusionAdvanced html
diffusionBasic html
disableApp html
displayGraph-defunct html
dockPanel html
eda-defunct html
eda.names-defunct html
enableApp html
existing.CytoscapeWindow-deprecated html
expandGroup html
exportImage html
exportNetwork html
exportNetworkToNDEx html
exportVisualStyles html
fitContent html
fitSelectedContent-deprecated html
floatPanel html
getAdjacentEdgeNames-defunct html
getAllEdgeAttributes-deprecated html
getAllEdges html
getAllNodeAttributes-deprecated html
getAllNodes html
getAppInformation html
getAppStatus html
getAppUpdates html
getArrowShapes html
getAttributeClassNames-defunct html
getAvailableApps html
getBackgroundColorDefault html
getCenter-deprecated html
getCollectionList html
getCollectionName html
getCollectionNetworks html
getCollectionSuid html
getCommandNames-deprecated html
getCommandNamesWithinNamespace-deprecated
html
getDefaultEdgeReverseSelectionColor-defunct
html
getDefaultNodeReverseSelectionColor-defunct
html
getDirectlyModifiableVisualProperties-deprecated
html
getDisabledApps html
getEdgeAttribute-deprecated html
getEdgeAttributeNames-deprecated html
getEdgeColor html
getEdgeCount html
getEdgeLineStyle html
getEdgeLineWidth html
getEdgeProperty html
getEdgeSelectionColorDefault html
getEdgeTargetArrowShape html
getFirstNeighbors html
getGraph-defunct html
getGraphFromCyWindow-deprecated html
getGroupInfo html
getInstalledApps html
getLayoutNameMapping html
getLayoutNames html
getLayoutPropertyNames html
getLayoutPropertyType html
getLayoutPropertyValue html
getLineStyles html
getNetworkCenter html
getNetworkCount html
getNetworkList html
getNetworkNDExId html
getNetworkName html
getNetworkProperty html
getNetworkSuid html
getNetworkViewSuid html
getNetworkViews html
getNetworkZoom html
getNodeAttribute-deprecated html
getNodeAttributeNames-deprecated html
getNodeColor html
getNodeCount html
getNodeHeight html
getNodePosition-defunct html
getNodeProperty html
getNodeSelectionColorDefault html
getNodeShapes html
getNodeSize html
getNodeWidth html
getSelectedEdgeCount html
getSelectedEdges html
getSelectedNodeCount html
getSelectedNodes html
getStyleDependencies html
getTableColumnNames html
getTableColumnTypes html
getTableColumns html
getTableValue html
getUninstalledApps html
getViewCoordinates-defunct html
getVisualPropertyDefault html
getVisualPropertyNames html
getVisualStyleNames html
getWindowCount-deprecated html
getWindowID-deprecated html
getWindowList-deprecated html
getZoom-deprecated html
hideAllPanels html
hideEdges html
hideNodes html
hidePanel html
hideSelectedEdges html
hideSelectedNodes html
importNetworkFromFile html
importNetworkFromNDEx html
initEdgeAttribute-defunct html
initNodeAttribute-defunct html
installApp html
invertEdgeSelection html
invertNodeSelection html
layoutCopycat html
layoutNetwork html
listGroups html
loadTableData html
lockNodeDimensions html
makeRandomGraph-defunct html
makeSimpleGraph html
makeSimpleIgraph html
mapTableColumn html
mapVisualProperty html
matchArrowColorToEdge html
noa-defunct html
noa.names-defunct html
openAppStore html
openSession html
ping-deprecated html
pluginVersion-deprecated html
predictTimeToDisplayGraph-defunct html
raiseWindow-defunct html
redraw-deprecated html
renameCytoscapeNetwork-deprecated html
renameNetwork html
renameTableColumn html
restoreLayout-defunct html
saveImage-deprecated html
saveLayout-defunct html
saveNetwork-deprecated html
saveSession html
selectAllEdges html
selectAllNodes html
selectEdges html
selectEdgesAdjacentToSelectedNodes html
selectEdgesConnectedBySelectedNodes-deprecated
html
selectEdgesConnectingSelectedNodes html
selectFirstNeighbors html
selectFirstNeighborsOfSelectedNodes-deprecated
html
selectNodes html
sendEdges-defunct html
sendNodes-defunct html
setBackgroundColorDefault html
setCenter-deprecated html
setCommandProperties-defunct html
setCurrentNetwork html
setCurrentView html
setDefaultEdgeReverseSelectionColor-defunct
html
setDefaultNodeReverseSelectionColor-defunct
html
setEdgeAttributes-defunct html
setEdgeColorBypass html
setEdgeColorDefault html
setEdgeColorMapping html
setEdgeFontFaceBypass html
setEdgeFontSizeBypass html
setEdgeFontSizeDefault html
setEdgeLabelBypass html
setEdgeLabelColorBypass html
setEdgeLabelMapping html
setEdgeLabelOpacityBypass html
setEdgeLineStyleBypass html
setEdgeLineStyleDefault html
setEdgeLineStyleMapping html
setEdgeLineWidthBypass html
setEdgeLineWidthDefault html
setEdgeLineWidthMapping html
setEdgeOpacityBypass html
setEdgeOpacityMapping html
setEdgePropertyBypass html
setEdgeSelectionColorDefault html
setEdgeSourceArrowColorBypass html
setEdgeSourceArrowColorDefault html
setEdgeSourceArrowColorMapping html
setEdgeSourceArrowMapping html
setEdgeSourceArrowShapeBypass html
setEdgeSourceArrowShapeDefault html
setEdgeTargetArrowColorBypass html
setEdgeTargetArrowColorDefault html
setEdgeTargetArrowColorMapping html
setEdgeTargetArrowMapping html
setEdgeTargetArrowShapeBypass html
setEdgeTargetArrowShapeDefault html
setEdgeTooltipBypass html
setEdgeTooltipMapping html
setGraph-defunct html
setLayoutProperties html
setNetworkCenterBypass html
setNetworkPropertyBypass html
setNetworkZoomBypass html
setNodeAttributes-defunct html
setNodeBorderColorBypass html
setNodeBorderColorDefault html
setNodeBorderColorMapping html
setNodeBorderOpacityBypass html
setNodeBorderWidthBypass html
setNodeBorderWidthDefault html
setNodeBorderWidthMapping html
setNodeColorBypass html
setNodeColorDefault html
setNodeColorMapping html
setNodeComboOpacityMapping html
setNodeFillOpacityBypass html
setNodeFontSizeBypass html
setNodeFontSizeDefault html
setNodeHeightBypass html
setNodeLabelBypass html
setNodeLabelColorBypass html
setNodeLabelColorDefault html
setNodeLabelMapping html
setNodeLabelOpacityBypass html
setNodeOpacityBypass html
setNodePosition-defunct html
setNodePropertyBypass html
setNodeSelectionColorDefault html
setNodeShapeBypass html
setNodeShapeDefault html
setNodeShapeMapping html
setNodeSizeBypass html
setNodeSizeDefault html
setNodeSizeMapping html
setNodeTooltipMapping html
setNodeWidthBypass html
setStyleDependencies html
setTooltipDismissDelay-defunct html
setTooltipInitialDelay-defunct html
setVisualPropertyDefault html
setVisualStyle html
setWindowSize-defunct html
setZoom-deprecated html
sfn-deprecated html
showGraphicsDetails-deprecated html
syncNodeCustomGraphicsSize html
toggleGraphicsDetails html
unhideAll html
unhideEdges html
unhideNodes html
uninstallApp html
updateApp html
updateNetworkInNDEx html
updateStyleDefaults html
updateStyleMapping html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'RCy3' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RCy3' as RCy3_2.0.88.zip
* DONE (RCy3)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'RCy3' successfully unpacked and MD5 sums checked
In R CMD INSTALL