Robert Gentleman
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/RBioinf |
| Branch: RELEASE_3_7 |
| Last Commit: 386a6d6 |
| Last Changed Date: 2018-04-30 10:35:08 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:33:47 -0400 (Wed, 17 Oct 2018).
| Package 1186/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RBioinf 1.40.0 Robert Gentleman
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: RBioinf |
| Version: 1.40.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/RBioinf_1.40.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.40.0.zip && rm RBioinf_1.40.0.tar.gz RBioinf_1.40.0.zip |
| StartedAt: 2018-10-16 18:42:01 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 18:42:49 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 47.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/RBioinf_1.40.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.40.0.zip && rm RBioinf_1.40.0.tar.gz RBioinf_1.40.0.zip
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install for i386
* installing *source* package 'RBioinf' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c rand.c -o rand.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/RBioinf.buildbin-libdir/RBioinf/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RBioinf'
finding HTML links ... done
Rcal html
S4Help html
asSimpleVector html
classList2Graph html
computeClassLinearization html
printWithNumbers html
randDNA html
simplePVect html
simpleRand html
simpleSort html
subClassNames html
superClasses html
traceMethods html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'RBioinf' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c rand.c -o rand.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/RBioinf.buildbin-libdir/RBioinf/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RBioinf' as RBioinf_1.40.0.zip
* DONE (RBioinf)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'RBioinf' successfully unpacked and MD5 sums checked
In R CMD INSTALL