Back to Multiple platform build/check report for BioC 3.7
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

BUILD BIN report for IPO on tokay2

This page was generated on 2018-10-17 08:42:42 -0400 (Wed, 17 Oct 2018).

Package 748/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IPO 1.6.0
Thomas Riebenbauer
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/IPO
Branch: RELEASE_3_7
Last Commit: 3063f1a
Last Changed Date: 2018-04-30 10:35:43 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: IPO
Version: 1.6.0
Command: rm -rf IPO.buildbin-libdir && mkdir IPO.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPO.buildbin-libdir IPO_1.6.0.tar.gz
StartedAt: 2018-10-17 06:35:20 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:35:51 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 31.0 seconds
RetCode: 0
Status:  OK  
PackageFile: IPO_1.6.0.zip
PackageFileSize: 526 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf IPO.buildbin-libdir && mkdir IPO.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPO.buildbin-libdir IPO_1.6.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'IPO' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IPO'
    finding HTML links ... done
    IPO-package                             html  
    attachList                              html  
    calcPPS                                 html  
    calculateXcmsSet                        html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/calculateXcmsSet.Rd:19: file link 'findPeaks.centWave' in package 'xcms' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/calculateXcmsSet.Rd:24: file link 'SerialParam' in package 'BiocParallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/calculateXcmsSet.Rd:25: file link 'MulticoreParam' in package 'BiocParallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/calculateXcmsSet.Rd:26: file link 'SnowParam' in package 'BiocParallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/calculateXcmsSet.Rd:53: file link 'findPeaks' in package 'xcms' does not exist and so has been treated as a topic
    combineParams                           html  
    createModel                             html  
    decode                                  html  
    findIsotopes.CAMERA                     html  
    findIsotopes.IPO                        html  
    getBbdParameter                         html  
    getCcdParameter                         html  
    getDefaultRetCorCenterSample            html  
    getDefaultRetGroupStartingParams        html  
    getDefaultXcmsSetStartingParams         html  
    getNormalizedResponse                   html  
    getRGTVValues                           html  
    optimizeRetGroup                        html  
    optimizeXcmsSet                         html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/optimizeXcmsSet.Rd:31: file link 'SerialParam' in package 'BiocParallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/optimizeXcmsSet.Rd:32: file link 'MulticoreParam' in package 'BiocParallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpkz62Uy/R.INSTALL173054d039f4/IPO/man/optimizeXcmsSet.Rd:33: file link 'SnowParam' in package 'BiocParallel' does not exist and so has been treated as a topic
    toMatrix                                html  
    typeCastParams                          html  
    writeParamsTable                        html  
    writeRScript                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'IPO' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IPO' as IPO_1.6.0.zip
* DONE (IPO)
In R CMD INSTALL
In R CMD INSTALL