Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:36:37 -0400 (Wed, 17 Oct 2018).
Package 693/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
HMMcopy 1.22.0 Daniel Lai
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: HMMcopy |
Version: 1.22.0 |
Command: rm -rf HMMcopy.buildbin-libdir && mkdir HMMcopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HMMcopy.buildbin-libdir HMMcopy_1.22.0.tar.gz |
StartedAt: 2018-10-17 06:31:21 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 06:31:51 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 30.2 seconds |
RetCode: 0 |
Status: OK |
PackageFile: HMMcopy_1.22.0.zip |
PackageFileSize: 1.357 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf HMMcopy.buildbin-libdir && mkdir HMMcopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HMMcopy.buildbin-libdir HMMcopy_1.22.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'HMMcopy' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c forward_backward.c -o forward_backward.o forward_backward.c: In function 'forward_backward': forward_backward.c:28:13: warning: unused variable 'tmp' [-Wunused-variable] int K, T, tmp; ^ C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c register.c -o register.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c viterbi.c -o viterbi.o viterbi.c: In function 'viterbi': viterbi.c:21:13: warning: unused variable 'tmp' [-Wunused-variable] int K, T, tmp; ^ C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o HMMcopy.dll tmp.def forward_backward.o register.o viterbi.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/HMMcopy.buildbin-libdir/HMMcopy/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'HMMcopy' finding HTML links ... done HMMcopy-dataset html HMMcopy-input html HMMcopy-internal html HMMcopy-output html HMMcopy-package html HMMcopy-visualize html HMMsegment html correctReadcount html wigsToRangedData html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'HMMcopy' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c forward_backward.c -o forward_backward.o forward_backward.c: In function 'forward_backward': forward_backward.c:28:13: warning: unused variable 'tmp' [-Wunused-variable] int K, T, tmp; ^ C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c register.c -o register.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c viterbi.c -o viterbi.o viterbi.c: In function 'viterbi': viterbi.c:21:13: warning: unused variable 'tmp' [-Wunused-variable] int K, T, tmp; ^ C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o HMMcopy.dll tmp.def forward_backward.o register.o viterbi.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/HMMcopy.buildbin-libdir/HMMcopy/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'HMMcopy' as HMMcopy_1.22.0.zip * DONE (HMMcopy) In R CMD INSTALL In R CMD INSTALL