Elana J. Fertig
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/CoGAPS |
| Branch: RELEASE_3_7 |
| Last Commit: 9d82c1f |
| Last Changed Date: 2018-07-26 15:59:34 -0400 (Thu, 26 Jul 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:23:10 -0400 (Wed, 17 Oct 2018).
| Package 287/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CoGAPS 3.0.2 Elana J. Fertig
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: CoGAPS |
| Version: 3.0.2 |
| Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL CoGAPS |
| StartedAt: 2018-10-15 18:06:41 -0400 (Mon, 15 Oct 2018) |
| EndedAt: 2018-10-15 18:07:48 -0400 (Mon, 15 Oct 2018) |
| EllapsedTime: 67.5 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL CoGAPS ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.7-bioc/R/library’ * installing *source* package ‘CoGAPS’ ... ** libs g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c Algorithms.cpp -o Algorithms.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c AtomicSupport.cpp -o AtomicSupport.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c Cogaps.cpp -o Cogaps.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c GibbsSampler.cpp -o GibbsSampler.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c Matrix.cpp -o Matrix.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c Random.cpp -o Random.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c test-runner.cpp -o test-runner.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testAlgorithms.cpp -o cpp_tests/testAlgorithms.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testAtomicSupport.cpp -o cpp_tests/testAtomicSupport.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testGibbsSampler.cpp -o cpp_tests/testGibbsSampler.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testMatrix.cpp -o cpp_tests/testMatrix.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testRandom.cpp -o cpp_tests/testRandom.o g++ -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=0 -I"/home/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.7-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c cpp_tests/testSerialization.cpp -o cpp_tests/testSerialization.o g++ -shared -L/home/biocbuild/bbs-3.7-bioc/R/lib -L/usr/local/lib -o CoGAPS.so Algorithms.o AtomicSupport.o Cogaps.o GibbsSampler.o Matrix.o Random.o RcppExports.o test-runner.o cpp_tests/testAlgorithms.o cpp_tests/testAtomicSupport.o cpp_tests/testGibbsSampler.o cpp_tests/testMatrix.o cpp_tests/testRandom.o cpp_tests/testSerialization.o -L/home/biocbuild/bbs-3.7-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.7-bioc/R/library/CoGAPS/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (CoGAPS)