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This page was generated on 2018-10-17 08:51:03 -0400 (Wed, 17 Oct 2018).
Package 133/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
BiocParallel 1.14.2 Bioconductor Package Maintainer
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | [ OK ] |
Package: BiocParallel |
Version: 1.14.2 |
Command: rm -rf BiocParallel.buildbin-libdir && mkdir BiocParallel.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BiocParallel_1.14.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BiocParallel.buildbin-libdir |
StartedAt: 2018-10-17 00:58:43 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 00:59:48 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 65.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: BiocParallel_1.14.2.tgz |
PackageFileSize: 1.025 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf BiocParallel.buildbin-libdir && mkdir BiocParallel.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BiocParallel_1.14.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BiocParallel.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=BiocParallel.buildbin-libdir BiocParallel_1.14.2.tar.gz' >>>>>>> * installing *source* package ‘BiocParallel’ ... ** libs clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/BH/include" -I/usr/local/include -fPIC -Wall -g -O2 -c ipcmutex.cpp -o ipcmutex.o clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BiocParallel.so ipcmutex.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.7-bioc/meat/BiocParallel.buildbin-libdir/BiocParallel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (BiocParallel) >>>>>>> >>>>>>> FIXING LINKS FOR BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "BiocParallel.buildbin-libdir/BiocParallel/libs//BiocParallel.so"