Back to Multiple platform build/check report for BioC 3.7
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for ASpli on tokay2

This page was generated on 2018-10-17 08:42:39 -0400 (Wed, 17 Oct 2018).

Package 77/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ASpli 1.6.0
Estefania Mancini
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/ASpli
Branch: RELEASE_3_7
Last Commit: 2d246b3
Last Changed Date: 2018-04-30 10:35:43 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ASpli
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ASpli_1.6.0.tar.gz && rm -rf ASpli.buildbin-libdir && mkdir ASpli.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ASpli.buildbin-libdir ASpli_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ASpli_1.6.0.zip && rm ASpli_1.6.0.tar.gz ASpli_1.6.0.zip
StartedAt: 2018-10-16 20:31:35 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:33:23 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 108.4 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ASpli_1.6.0.tar.gz && rm -rf ASpli.buildbin-libdir && mkdir ASpli.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ASpli.buildbin-libdir ASpli_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ASpli_1.6.0.zip && rm ASpli_1.6.0.tar.gz ASpli_1.6.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2224k  100 2224k    0     0  37.3M      0 --:--:-- --:--:-- --:--:-- 42.5M

install for i386

* installing *source* package 'ASpli' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ASpli'
    finding HTML links ... done
    ASpli-package                           html  
    ASpliAS-class                           html  
    ASpliCounts-class                       html  
    ASpliCounts                             html  
    ASpliDU-class                           html  
    ASpliFeatures-class                     html  
    AsDiscover-methods                      html  
    DUreport                                html  
    finding level-2 HTML links ... done

    DUreportBinSplice-method                html  
    acc_AS                                  html  
    acc_DU                                  html  
    acc_counts                              html  
    acc_features                            html  
    binGenome-methods                       html  
    binGenome                               html  
    containsJunctions-function              html  
    example_data                            html  
    filterDU-method                         html  
    getConditions-function                  html  
    junctionDUreport                        html  
    loadBAM                                 html  
    mergeBinDUAS-method                     html  
    plotBins                                html  
    plotGenomicRegions                      html  
    rds                                     html  
    readCounts                              html  
    show-methods                            html  
    subset-methods                          html  
    write-methods                           html  
    write                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'ASpli' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ASpli' as ASpli_1.6.0.zip
* DONE (ASpli)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'ASpli' successfully unpacked and MD5 sums checked
In R CMD INSTALL