Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:42:39 -0400 (Wed, 17 Oct 2018).
Package 1211/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
recount 1.6.3 Leonardo Collado-Torres
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: recount |
Version: 1.6.3 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/recount_1.6.3.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL recount_1.6.3.zip && rm recount_1.6.3.tar.gz recount_1.6.3.zip |
StartedAt: 2018-10-16 20:36:25 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 20:37:44 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 79.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/recount_1.6.3.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL recount_1.6.3.zip && rm recount_1.6.3.tar.gz recount_1.6.3.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 5761k 100 5761k 0 0 51.2M 0 --:--:-- --:--:-- --:--:-- 53.5M install for i386 * installing *source* package 'recount' ... ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder' ** help *** installing help indices converting help for package 'recount' finding HTML links ... done abstract_search html add_metadata html add_predictions html all_metadata html browse_study html coverage_matrix html download_study html expressed_regions html find_geo html geo_characteristics html geo_info html getRPKM html read_counts html recount-package html recount_abstract html recount_exons html recount_genes html recount_url html reproduce_ranges html rse_gene_SRP009615 html scale_counts html snaptron_query html ** building package indices ** installing vignettes ** testing if installed package can be loaded No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder' In R CMD INSTALL install for x64 * installing *source* package 'recount' ... ** testing if installed package can be loaded No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder' * MD5 sums packaged installation of 'recount' as recount_1.6.3.zip * DONE (recount) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'recount' successfully unpacked and MD5 sums checked In R CMD INSTALL