Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:43:17 -0400 (Wed, 17 Oct 2018).
Package 1178/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
ramwas 1.4.0 Andrey A Shabalin
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: ramwas |
Version: 1.4.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ramwas_1.4.0.tar.gz && rm -rf ramwas.buildbin-libdir && mkdir ramwas.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ramwas.buildbin-libdir ramwas_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ramwas_1.4.0.zip && rm ramwas_1.4.0.tar.gz ramwas_1.4.0.zip |
StartedAt: 2018-10-16 20:20:12 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 20:21:37 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 84.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ramwas_1.4.0.tar.gz && rm -rf ramwas.buildbin-libdir && mkdir ramwas.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ramwas.buildbin-libdir ramwas_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ramwas_1.4.0.zip && rm ramwas_1.4.0.tar.gz ramwas_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 167k 100 167k 0 0 3083k 0 --:--:-- --:--:-- --:--:-- 3495k install for i386 * installing *source* package 'ramwas' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c rw_c_code.c -o rw_c_code.o C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o ramwas.dll tmp.def rw_c_code.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/ramwas.buildbin-libdir/ramwas/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ramwas' finding HTML links ... done MakeBED html QCs html RaMWAS html cachedRDSload html findBestNpvs html get html getCpGset html injectSNPsMAF html finding level-2 HTML links ... done insilicoFASTQ html isAbsolutePath html makefullpath html manhattan html mat2cols html orthonormalizeCovariates html parameterDump html parameterPreprocess html parametersFromFile html pipeline html plotCV html plotFragmentSizeDistributionEstimate html plotPC html processCommandLine html pvalue2qvalue html qqplotFast html ramwas0createArtificialData html ramwasAnnotateLocations html ramwasParameters html rowcolSumSq html rwDataClass-class html subsetData html testPhenotype html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'ramwas' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c rw_c_code.c -o rw_c_code.o C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o ramwas.dll tmp.def rw_c_code.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/ramwas.buildbin-libdir/ramwas/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'ramwas' as ramwas_1.4.0.zip * DONE (ramwas) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'ramwas' successfully unpacked and MD5 sums checked In R CMD INSTALL