Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:33:05 -0400 (Wed, 17 Oct 2018).
Package 1076/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
pdInfoBuilder 1.44.0 Benilton Carvalho
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: pdInfoBuilder |
Version: 1.44.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/pdInfoBuilder_1.44.0.tar.gz && rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL pdInfoBuilder_1.44.0.zip && rm pdInfoBuilder_1.44.0.tar.gz pdInfoBuilder_1.44.0.zip |
StartedAt: 2018-10-16 19:49:32 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 19:50:59 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 86.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/pdInfoBuilder_1.44.0.tar.gz && rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL pdInfoBuilder_1.44.0.zip && rm pdInfoBuilder_1.44.0.tar.gz pdInfoBuilder_1.44.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 359k 100 359k 0 0 6169k 0 --:--:-- --:--:-- --:--:-- 6917k install for i386 * installing *source* package 'pdInfoBuilder' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pdInfoBuilder.c -o pdInfoBuilder.o C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' ** help *** installing help indices converting help for package 'pdInfoBuilder' finding HTML links ... done AffyClariomSPDInfoPkgSeed-class html AffyExpressionPDInfoPkgSeed-class html AffySNPCNVPDInfoPkgSeed-class html AffySNPCNVPDInfoPkgSeed2-class html AffySNPPDInfoPkgSeed-class html AffySNPPDInfoPkgSeed2-class html AffySTPDInfoPkgSeed-class html AffyTilingPDInfoPkgSeed-class html GenericArrayFunctions html NgsExpressionPDInfoPkgSeed-class html NgsTilingPDInfoPkgSeed-class html NimbleGenPDInfoPkgSeed-class html chipName html getGeometry html makePdInfoPackage html ** building package indices ** installing vignettes 'BuildingPDInfoPkgs.Rnw' 'howto-AffymetrixMapping.Rnw' ** testing if installed package can be loaded No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' In R CMD INSTALL install for x64 * installing *source* package 'pdInfoBuilder' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pdInfoBuilder.c -o pdInfoBuilder.o C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs/x64 ** testing if installed package can be loaded No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' * MD5 sums packaged installation of 'pdInfoBuilder' as pdInfoBuilder_1.44.0.zip * DONE (pdInfoBuilder) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'pdInfoBuilder' successfully unpacked and MD5 sums checked In R CMD INSTALL