Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:42:09 -0400 (Wed, 17 Oct 2018).
Package 1035/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
oppar 1.8.0 Soroor Hediyeh zadeh
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: oppar |
Version: 1.8.0 |
Command: rm -rf oppar.buildbin-libdir && mkdir oppar.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=oppar.buildbin-libdir oppar_1.8.0.tar.gz |
StartedAt: 2018-10-17 06:45:37 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 06:46:03 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 26.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: oppar_1.8.0.zip |
PackageFileSize: 5.204 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf oppar.buildbin-libdir && mkdir oppar.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=oppar.buildbin-libdir oppar_1.8.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'oppar' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_init_oppar.c -o R_init_oppar.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c kernel_estimation.c -o kernel_estimation.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c ks_test.c -o ks_test.o ks_test.c: In function 'ks_sample': ks_test.c:22:9: warning: unused variable 'mx_value' [-Wunused-variable] double mx_value = 0.0; ^ C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o oppar.dll tmp.def R_init_oppar.o kernel_estimation.o ks_test.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/oppar.buildbin-libdir/oppar/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'oppar' finding HTML links ... done OPPARList-class html bcm html eset html getSampleOutlier html getSubtypeProbes html gsva html maupin html opa html oppar html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'oppar' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_init_oppar.c -o R_init_oppar.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c kernel_estimation.c -o kernel_estimation.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c ks_test.c -o ks_test.o ks_test.c: In function 'ks_sample': ks_test.c:22:9: warning: unused variable 'mx_value' [-Wunused-variable] double mx_value = 0.0; ^ C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o oppar.dll tmp.def R_init_oppar.o kernel_estimation.o ks_test.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/oppar.buildbin-libdir/oppar/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'oppar' as oppar_1.8.0.zip * DONE (oppar) In R CMD INSTALL In R CMD INSTALL