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INSTALL report for hmdbQuery on tokay2

This page was generated on 2018-10-17 08:45:07 -0400 (Wed, 17 Oct 2018).

Package 692/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
hmdbQuery 1.0.1
VJ Carey
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/hmdbQuery
Branch: RELEASE_3_7
Last Commit: b14db02
Last Changed Date: 2018-05-09 12:06:39 -0400 (Wed, 09 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: hmdbQuery
Version: 1.0.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/hmdbQuery_1.0.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.0.1.zip && rm hmdbQuery_1.0.1.tar.gz hmdbQuery_1.0.1.zip
StartedAt: 2018-10-16 18:48:36 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:49:04 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 28.2 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/hmdbQuery_1.0.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.0.1.zip && rm hmdbQuery_1.0.1.tar.gz hmdbQuery_1.0.1.zip
###
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install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'hmdbQuery' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'hmdbQuery'
    finding HTML links ... done
    HmdbEntry-class                         html  
    HmdbEntry                               html  
    biospecimens-HmdbEntry-method           html  
    diseases-HmdbEntry-method               html  
    hmdb1                                   html  
    hmdb_disease                            html  
    hmdb_gene                               html  
    hmdb_omim                               html  
    hmdb_protein                            html  
    store-HmdbEntry-method                  html  
    tissues-HmdbEntry-method                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'hmdbQuery' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'hmdbQuery' as hmdbQuery_1.0.1.zip
* DONE (hmdbQuery)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'hmdbQuery' successfully unpacked and MD5 sums checked
In R CMD INSTALL