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BUILD BIN report for TargetSearch on tokay2

This page was generated on 2018-10-17 08:34:16 -0400 (Wed, 17 Oct 2018).

Package 1464/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TargetSearch 1.36.1
Alvaro Cuadros-Inostroza
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/TargetSearch
Branch: RELEASE_3_7
Last Commit: 17add3a
Last Changed Date: 2018-05-03 04:54:46 -0400 (Thu, 03 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TargetSearch
Version: 1.36.1
Command: rm -rf TargetSearch.buildbin-libdir && mkdir TargetSearch.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TargetSearch.buildbin-libdir TargetSearch_1.36.1.tar.gz
StartedAt: 2018-10-17 07:03:38 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 07:04:00 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 22.2 seconds
RetCode: 0
Status:  OK  
PackageFile: TargetSearch_1.36.1.zip
PackageFileSize: 964.8 KiB

Command output

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###
### Running command:
###
###   rm -rf TargetSearch.buildbin-libdir && mkdir TargetSearch.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TargetSearch.buildbin-libdir TargetSearch_1.36.1.tar.gz
###
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install for i386

* installing *source* package 'TargetSearch' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c file.c -o file.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c find_peaks.c -o find_peaks.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c getLine.c -o getLine.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c hpf.c -o hpf.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ncdf.c -o ncdf.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c netcdf_peak_finding.c -o netcdf_peak_finding.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ppc.c -o ppc.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o TargetSearch.dll tmp.def Rinit.o file.o find_peaks.o getLine.o hpf.o ncdf.o netcdf_peak_finding.o ppc.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/TargetSearch.buildbin-libdir/TargetSearch/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TargetSearch'
    finding HTML links ... done
    FAMEoutliers                            html  
    FindAllPeaks                            html  
    FindPeaks                               html  
    ImportFameSettings                      html  
    ImportLibrary                           html  
    ImportSamples                           html  
    NetCDFPeakFinding                       html  
    Profile                                 html  
    ProfileCleanUp                          html  
    RIcorrect                               html  
    TSExample                               html  
    TargetSearch-package                    html  
    TargetSearchGUI                         html  
    Write.Results                           html  
    baseline                                html  
    defunct                                 html  
    file                                    html  
    fixRI                                   html  
    medianRILib                             html  
    peakCDFextraction                       html  
    peakFind                                html  
    plotFAME                                html  
    plotPeak                                html  
    plotPeakRI                              html  
    plotPeakSimple                          html  
    plotRIdev                               html  
    plotSpectra                             html  
    quantMatrix                             html  
    ri2rt                                   html  
    riMatrix                                html  
    rt2ri                                   html  
    sampleRI                                html  
    tsLib-class                             html  
    tsMSdata-class                          html  
    tsProfile-class                         html  
    tsRim-class                             html  
    tsSample-class                          html  
    writeLibText                            html  
    writeMSP                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'TargetSearch' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c file.c -o file.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c find_peaks.c -o find_peaks.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c getLine.c -o getLine.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c hpf.c -o hpf.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c ncdf.c -o ncdf.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c netcdf_peak_finding.c -o netcdf_peak_finding.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c ppc.c -o ppc.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o TargetSearch.dll tmp.def Rinit.o file.o find_peaks.o getLine.o hpf.o ncdf.o netcdf_peak_finding.o ppc.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/TargetSearch.buildbin-libdir/TargetSearch/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TargetSearch' as TargetSearch_1.36.1.zip
* DONE (TargetSearch)
In R CMD INSTALL
In R CMD INSTALL