Back to Multiple platform build/check report for BioC 3.7
ABCDEFGHIJKLMN[O]PQRSTUVWXYZ

BUILD BIN report for OncoScore on tokay2

This page was generated on 2018-10-17 08:41:58 -0400 (Wed, 17 Oct 2018).

Package 1025/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OncoScore 1.8.0
Daniele Ramazzotti
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/OncoScore
Branch: RELEASE_3_7
Last Commit: a625a79
Last Changed Date: 2018-04-30 10:35:41 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: OncoScore
Version: 1.8.0
Command: rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OncoScore.buildbin-libdir OncoScore_1.8.0.tar.gz
StartedAt: 2018-10-17 06:45:17 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:45:31 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 13.9 seconds
RetCode: 0
Status:  OK  
PackageFile: OncoScore_1.8.0.zip
PackageFileSize: 270.3 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OncoScore.buildbin-libdir OncoScore_1.8.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'OncoScore' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OncoScore'
    finding HTML links ... done
    combine.query.results                   html  
    combine.single.matrix                   html  
    compute.frequencies.scores              html  
    compute.oncoscore                       html  
    compute.oncoscore.from.region           html  
    compute.oncoscore.timeseries            html  
    estimate.oncogenes                      html  
    genes                                   html  
    get.genes.from.biomart                  html  
    get.list.from.xml                       html  
    get.pubmed.driver.analysis              html  
    perform.query                           html  
    perform.query.from.region               html  
    perform.query.timeseries                html  
    plot.oncoscore                          html  
    plot.oncoscore.timeseries               html  
    query                                   html  
    query.timepoints                        html  
    timepoints                              html  
    try.scan                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'OncoScore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OncoScore' as OncoScore_1.8.0.zip
* DONE (OncoScore)
In R CMD INSTALL
In R CMD INSTALL